Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33595

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
2,964,286	+				-0.4
2,964,286	+				-0.3
2,964,331	-				-0.0
2,964,407	+				-0.3
2,964,485	+		RR42_RS33590	0.14	+0.6
2,964,506	+		RR42_RS33590	0.17	-0.4
2,964,655	-		RR42_RS33590	0.36	+0.7
2,964,730	-		RR42_RS33590	0.46	-0.1
2,964,733	-		RR42_RS33590	0.47	+0.7
2,964,739	-		RR42_RS33590	0.48	+0.3
2,964,753	+		RR42_RS33590	0.49	-0.8
2,964,753	+		RR42_RS33590	0.49	+0.5
2,964,754	-		RR42_RS33590	0.50	-0.4
2,964,754	-		RR42_RS33590	0.50	+0.3
2,964,892	-		RR42_RS33590	0.68	-0.5
2,964,892	-		RR42_RS33590	0.68	-0.3
2,965,078	+				+0.4
2,965,078	+				+1.2
2,965,078	+				+2.1
2,965,079	-				+0.5
2,965,325	+		RR42_RS33595	0.47	-0.1
2,965,326	-		RR42_RS33595	0.47	-1.0
2,965,326	-		RR42_RS33595	0.47	-1.7
2,965,498	+				+0.1
2,965,499	-				-0.4
2,965,499	-				+0.6
2,965,520	+				+0.5
2,965,520	+				-0.5
2,965,524	-				+0.0
2,965,555	+				-0.6
2,965,556	-				-0.6
2,965,556	-				+0.8
2,966,177	+		RR42_RS33600	0.84	+0.5
2,966,272	+				+0.8
2,966,273	-				+0.1
2,966,273	-				-0.5
2,966,274	+				+1.0
2,966,275	-				+0.7
2,966,275	-				+0.4
2,966,275	-				-0.3
2,966,290	-				+0.6