Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32620

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
2,714,605	+		RR42_RS32615	0.42	-0.5
2,714,605	+		RR42_RS32615	0.42	-0.8
2,714,606	-		RR42_RS32615	0.43	-0.1
2,714,606	-		RR42_RS32615	0.43	+0.1
2,714,927	-		RR42_RS32615	0.82	+0.0
2,714,927	-		RR42_RS32615	0.82	-1.4
2,714,929	+		RR42_RS32615	0.82	+0.5
2,714,929	+		RR42_RS32615	0.82	-0.3
2,714,929	+		RR42_RS32615	0.82	+0.0
2,714,930	-		RR42_RS32615	0.82	-0.3
2,714,930	-		RR42_RS32615	0.82	+0.8
2,714,930	-		RR42_RS32615	0.82	+0.7
2,714,998	+				-0.2
2,714,998	+				-0.0
2,715,062	-				-0.6
2,715,157	+				+1.0
2,715,306	+				+0.1
2,715,307	-				+1.0
2,715,526	+				-1.5
2,715,527	-				-0.2
2,715,603	+				-0.2
2,715,603	+				-0.1
2,715,603	+				-0.0
2,715,603	+				+0.5
2,715,604	-				+0.6
2,715,604	-				-0.2
2,715,604	-				+0.6
2,715,895	+		RR42_RS32620	0.16	-0.2
2,715,895	+		RR42_RS32620	0.16	-0.6
2,715,980	-		RR42_RS32620	0.21	-0.3
2,715,980	-		RR42_RS32620	0.21	+0.2
2,715,980	-		RR42_RS32620	0.21	-0.3
2,716,024	+		RR42_RS32620	0.23	-1.3
2,716,024	+		RR42_RS32620	0.23	+0.5
2,716,025	-		RR42_RS32620	0.23	+0.4
2,716,025	-		RR42_RS32620	0.23	-0.3
2,716,221	+		RR42_RS32620	0.34	-0.7
2,716,221	+		RR42_RS32620	0.34	-0.4
2,716,685	+		RR42_RS32620	0.60	-0.3
2,716,685	+		RR42_RS32620	0.60	-0.3
2,716,685	+		RR42_RS32620	0.60	-0.9
2,717,477	+				-0.1
2,717,478	-				+0.1
2,717,612	+				-0.4
2,717,646	+		RR42_RS32625	0.13	-0.8
2,717,688	+		RR42_RS32625	0.17	-0.2
2,717,788	-		RR42_RS32625	0.26	+0.0
2,718,032	-		RR42_RS32625	0.49	-1.2
2,718,169	+		RR42_RS32625	0.62	+0.6
2,718,170	-		RR42_RS32625	0.63	+0.4
2,718,305	+		RR42_RS32625	0.75	-0.5
2,718,376	-		RR42_RS32625	0.82	-0.7
2,718,380	-		RR42_RS32625	0.83	-1.1