Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30930

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
2,320,150	-				+1.0
2,320,213	-				+0.5
2,320,349	+				+0.2
2,320,350	-				+0.2
2,320,350	-				-1.8
2,320,350	-				-1.0
2,320,710	-		RR42_RS30930	0.15	-0.6
2,320,710	-		RR42_RS30930	0.15	+0.4
2,320,710	-		RR42_RS30930	0.15	-0.1
2,321,019	-		RR42_RS30930	0.28	-1.4
2,321,078	-		RR42_RS30930	0.31	+0.8
2,321,080	+		RR42_RS30930	0.31	-1.8
2,321,081	-		RR42_RS30930	0.31	-0.7
2,321,375	-		RR42_RS30930	0.43	-1.9
2,321,375	-		RR42_RS30930	0.43	-0.9
2,321,581	+		RR42_RS30930	0.52	-0.1
2,321,582	-		RR42_RS30930	0.52	+0.1
2,321,817	+		RR42_RS30930	0.62	-1.2
2,321,818	-		RR42_RS30930	0.62	-1.9
2,322,140	-		RR42_RS30930	0.75	-1.7
2,322,156	+		RR42_RS30930	0.76	-2.1
2,322,381	-		RR42_RS30930	0.85	-2.3
2,322,503	-				-1.2
2,322,647	+				+0.4
2,322,647	+				-0.3
2,322,647	+				-0.7
2,322,647	+				-2.7
2,322,823	-				+0.7
2,322,856	+				+0.1
2,322,892	-				+1.5
2,322,892	-				+0.8
2,322,892	-				-0.2
2,322,893	+				+0.6
2,322,893	+				-0.0
2,322,893	+				-0.2
2,322,893	+				+0.1
2,322,894	-				+0.5
2,322,894	-				+0.7
2,322,896	-				-1.1
2,322,896	-				+0.2
2,322,896	-				-0.3
2,322,896	-				-2.5
2,323,052	+		RR42_RS30935	0.36	+1.1
2,323,053	-		RR42_RS30935	0.36	-0.4
2,323,233	+		RR42_RS30935	0.81	-0.1
2,323,254	+		RR42_RS30935	0.86	-0.4
2,323,254	+		RR42_RS30935	0.86	+0.4
2,323,255	-		RR42_RS30935	0.86	-0.3
2,323,255	-		RR42_RS30935	0.86	-0.3
2,323,330	+				+0.3
2,323,684	+		RR42_RS30940	0.24	+0.2
2,323,684	+		RR42_RS30940	0.24	+0.1