Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30835

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
2,295,411	+		RR42_RS30830	0.40	-1.1
2,295,411	+		RR42_RS30830	0.40	+0.1
2,295,424	+		RR42_RS30830	0.42	-0.2
2,295,425	-		RR42_RS30830	0.42	+0.2
2,295,591	+		RR42_RS30830	0.57	-0.4
2,295,591	+		RR42_RS30830	0.57	+0.4
2,295,592	-		RR42_RS30830	0.57	-0.6
2,295,743	-		RR42_RS30830	0.72	+0.1
2,295,754	-		RR42_RS30830	0.73	+0.6
2,295,754	-		RR42_RS30830	0.73	-1.4
2,295,891	+		RR42_RS30830	0.86	-0.8
2,295,891	+		RR42_RS30830	0.86	+0.4
2,295,891	+		RR42_RS30830	0.86	-0.2
2,295,954	+				-0.7
2,295,954	+				-0.5
2,295,954	+				-0.1
2,295,954	+				-0.0
2,295,955	-				-1.1
2,296,050	-				+0.7
2,296,050	-				+0.0
2,296,065	+				-0.4
2,296,065	+				+0.3
2,296,065	+				+0.0
2,296,065	+				-0.3
2,296,084	-				+0.1
2,296,176	+				-0.0
2,296,176	+				-0.8
2,296,182	+				-1.0
2,296,183	-				+0.9
2,296,195	-				-0.4
2,296,207	+				-0.0
2,296,207	+				+0.8
2,296,208	-				-0.2
2,296,208	-				-1.1
2,296,208	-				-0.0
2,296,289	+		RR42_RS30835	0.17	-0.2
2,296,504	+		RR42_RS30835	0.62	-0.3
2,296,505	-		RR42_RS30835	0.62	-1.7
2,296,548	+		RR42_RS30835	0.71	-0.4
2,296,548	+		RR42_RS30835	0.71	-0.9
2,296,549	-		RR42_RS30835	0.71	-0.9
2,296,643	+				+0.3
2,296,644	-				+0.1
2,296,644	-				+0.2
2,296,671	+				+0.7
2,296,672	-				+0.1
2,296,704	-				+0.4
2,297,129	-		RR42_RS30840	0.32	+0.1
2,297,297	+		RR42_RS30840	0.46	+0.7
2,297,298	-		RR42_RS30840	0.46	+0.3
2,297,298	-		RR42_RS30840	0.46	+0.2
2,297,466	+		RR42_RS30840	0.60	-1.1