Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28090

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
1,660,917	+		RR42_RS28080	0.79	-0.3
1,660,982	+		RR42_RS28080	0.87	+0.1
1,660,983	-		RR42_RS28080	0.88	+0.2
1,661,122	+				+0.8
1,661,123	-				-0.1
1,661,213	-				+0.7
1,661,230	+				+0.9
1,661,235	+				-1.1
1,661,585	+		RR42_RS28085	0.61	+1.3
1,661,586	-		RR42_RS28085	0.61	-0.5
1,662,042	-		RR42_RS28090	0.34	+0.6
1,662,079	+		RR42_RS28090	0.40	-0.9
1,662,353	+		RR42_RS28090	0.85	-0.8
1,662,353	+		RR42_RS28090	0.85	-0.6
1,662,447	+				-0.0
1,662,448	-				+0.4
1,662,448	-				+0.0
1,662,448	-				-0.3
1,662,448	-				+0.2
1,662,448	-				-0.4
1,662,451	+				+0.0
1,662,451	+				+0.9
1,662,451	+				-1.6
1,662,452	-				-0.6
1,662,452	-				-0.3
1,662,493	+				+1.4
1,662,511	+				-1.0
1,662,512	-				+0.0
1,662,608	+		RR42_RS28095	0.14	-0.7
1,662,609	-		RR42_RS28095	0.14	-0.0
1,662,609	-		RR42_RS28095	0.14	+1.0
1,662,610	+		RR42_RS28095	0.14	-0.4
1,662,611	-		RR42_RS28095	0.14	+0.2
1,662,818	-		RR42_RS28095	0.32	+0.4
1,662,818	-		RR42_RS28095	0.32	-0.1
1,663,146	-		RR42_RS28095	0.60	-0.8
1,663,399	+		RR42_RS28095	0.82	-0.2