Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25605

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
1,087,651	+				-0.4
1,087,652	-				+0.9
1,087,652	-				+0.3
1,087,693	+				-0.3
1,087,714	-				-0.3
1,088,016	+		RR42_RS25600	0.39	+0.1
1,088,043	+		RR42_RS25600	0.42	+1.9
1,088,043	+		RR42_RS25600	0.42	+1.3
1,088,443	-				+0.5
1,088,587	+				-0.4
1,088,587	+				+0.3
1,088,588	-				+0.2
1,088,626	+				+1.0
1,088,626	+				+0.0
1,088,627	-				-1.4
1,088,627	-				+0.3
1,088,792	-		RR42_RS25605	0.19	+1.4
1,088,809	+		RR42_RS25605	0.20	-0.4
1,088,809	+		RR42_RS25605	0.20	-0.3
1,088,809	+		RR42_RS25605	0.20	+0.1
1,088,810	-		RR42_RS25605	0.20	-0.7
1,088,810	-		RR42_RS25605	0.20	-0.3
1,088,899	+		RR42_RS25605	0.29	-0.3
1,088,935	+		RR42_RS25605	0.32	+0.5
1,089,457	+		RR42_RS25605	0.80	+0.7
1,089,457	+		RR42_RS25605	0.80	-0.1
1,089,547	+		RR42_RS25605	0.88	-0.1
1,089,550	+		RR42_RS25605	0.88	+1.0
1,089,550	+		RR42_RS25605	0.88	+1.6
1,089,551	-		RR42_RS25605	0.88	+0.2
1,089,630	+				-0.1
1,089,652	+				-0.0
1,089,827	+				+1.0
1,089,827	+				-0.1
1,089,828	-				-0.3
1,089,828	-				+0.5
1,089,828	-				+0.2
1,089,828	-				-1.3
1,089,828	-				-0.8
1,089,828	-				-0.7
1,089,828	-				-0.5
1,089,828	-				+0.6
1,089,830	+				-1.5
1,089,831	-				+1.3
1,089,875	+				-0.0
1,089,882	-				+0.4
1,089,909	-				+1.0
1,089,909	-				-0.9
1,089,947	+		RR42_RS25610	0.14	+0.0
1,089,947	+		RR42_RS25610	0.14	+0.4
1,089,998	-		RR42_RS25610	0.20	+0.5
1,090,025	+		RR42_RS25610	0.23	+0.2
1,090,031	+		RR42_RS25610	0.24	+0.4
1,090,031	+		RR42_RS25610	0.24	+0.1
1,090,031	+		RR42_RS25610	0.24	+0.6
1,090,061	+		RR42_RS25610	0.28	+0.2
1,090,197	-		RR42_RS25610	0.44	-0.0
1,090,197	-		RR42_RS25610	0.44	-0.3
1,090,197	-		RR42_RS25610	0.44	-2.7
1,090,197	-		RR42_RS25610	0.44	+0.2
1,090,294	+		RR42_RS25610	0.55	-1.4
1,090,294	+		RR42_RS25610	0.55	-1.1
1,090,294	+		RR42_RS25610	0.55	-0.7
1,090,450	-		RR42_RS25610	0.74	-0.6
1,090,673	+				-0.8
1,090,673	+				+0.0
1,090,673	+				+1.0
1,090,674	-				+0.0
1,090,674	-				+0.8