Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20510

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
4,442,724	-				+1.3
4,442,726	+				-0.2
4,442,726	+				-0.2
4,442,727	-				-0.1
4,442,727	-				-0.6
4,442,792	+				+0.9
4,442,857	-				-0.1
4,443,017	+		RR42_RS20505	0.12	+0.2
4,443,021	-		RR42_RS20505	0.13	-0.7
4,443,059	+		RR42_RS20505	0.21	-0.0
4,443,059	+		RR42_RS20505	0.21	+0.1
4,443,060	-		RR42_RS20505	0.21	-0.4
4,443,348	+		RR42_RS20505	0.82	+0.0
4,443,348	+		RR42_RS20505	0.82	-0.5
4,443,348	+		RR42_RS20505	0.82	+2.0
4,443,348	+		RR42_RS20505	0.82	+0.7
4,443,349	-		RR42_RS20505	0.82	-0.2
4,443,349	-		RR42_RS20505	0.82	+0.3
4,443,349	-		RR42_RS20505	0.82	+0.0
4,443,354	+		RR42_RS20505	0.83	-1.2
4,443,471	+				+0.2
4,443,472	-				-0.4
4,443,472	-				+0.3
4,443,472	-				-0.2
4,443,472	-				+0.3
4,443,496	+				-1.4
4,443,497	-				+0.3
4,443,506	+				-0.1
4,443,506	+				-0.9
4,443,506	+				+0.8
4,443,507	-				+0.6
4,443,507	-				+0.0
4,443,507	-				+0.3
4,443,507	-				-0.0
4,443,507	-				+0.2
4,443,598	+				+0.5
4,443,599	-				+0.1
4,443,637	-				+0.6
4,443,728	+		RR42_RS20510	0.33	+1.9
4,443,728	+		RR42_RS20510	0.33	-0.0
4,443,728	+		RR42_RS20510	0.33	-0.6
4,443,728	+		RR42_RS20510	0.33	-0.9
4,443,729	-		RR42_RS20510	0.33	-0.5
4,443,729	-		RR42_RS20510	0.33	-1.3
4,443,776	+		RR42_RS20510	0.57	-0.6
4,443,776	+		RR42_RS20510	0.57	-0.6
4,443,776	+		RR42_RS20510	0.57	-0.1
4,443,776	+		RR42_RS20510	0.57	-0.4
4,443,776	+		RR42_RS20510	0.57	+0.0
4,443,776	+		RR42_RS20510	0.57	+0.7
4,443,776	+		RR42_RS20510	0.57	-0.8
4,443,777	-		RR42_RS20510	0.58	-1.7
4,443,777	-		RR42_RS20510	0.58	-0.1
4,443,777	-		RR42_RS20510	0.58	+0.2
4,443,777	-		RR42_RS20510	0.58	+0.0
4,443,786	-		RR42_RS20510	0.63	-0.1
4,443,827	+		RR42_RS20510	0.84	+0.6
4,443,828	-		RR42_RS20510	0.84	+0.6
4,443,828	-		RR42_RS20510	0.84	-1.9
4,444,040	+				-0.3
4,444,040	+				-0.5
4,444,041	-				+0.1
4,444,097	+				+0.5
4,444,097	+				-0.2
4,444,098	-				-1.4
4,444,098	-				-1.1
4,444,295	+		RR42_RS20515	0.17	-2.6
4,444,295	+		RR42_RS20515	0.17	-0.7
4,444,296	-		RR42_RS20515	0.17	-0.2
4,444,427	+		RR42_RS20515	0.23	-1.1
4,444,427	+		RR42_RS20515	0.23	-0.5
4,444,428	-		RR42_RS20515	0.24	-0.5
4,444,436	+		RR42_RS20515	0.24	-0.8
4,444,436	+		RR42_RS20515	0.24	-0.1
4,444,437	-		RR42_RS20515	0.24	+0.3
4,444,844	+		RR42_RS20515	0.44	-0.8
4,444,844	+		RR42_RS20515	0.44	-0.5
4,444,844	+		RR42_RS20515	0.44	+0.3
4,444,844	+		RR42_RS20515	0.44	-1.3
4,444,844	+		RR42_RS20515	0.44	+0.6
4,444,844	+		RR42_RS20515	0.44	-1.3
4,444,844	+		RR42_RS20515	0.44	-0.0
4,444,845	-		RR42_RS20515	0.44	-1.1
4,444,845	-		RR42_RS20515	0.44	-0.5
4,444,845	-		RR42_RS20515	0.44	-0.4
4,444,845	-		RR42_RS20515	0.44	-0.0
4,444,845	-		RR42_RS20515	0.44	-0.7