Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18020

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
3,895,387	+				+0.7
3,895,387	+				-0.3
3,895,387	+				+0.3
3,895,387	+				+0.6
3,895,387	+				+0.5
3,895,387	+				+0.2
3,895,387	+				+2.9
3,895,388	-				+0.2
3,895,388	-				+0.2
3,895,388	-				+0.5
3,895,388	-				-0.3
3,895,388	-				+0.9
3,895,388	-				+2.2
3,895,388	-				-0.3
3,895,388	-				+0.9
3,895,388	-				+0.8
3,895,388	-				+0.2
3,895,552	+		RR42_RS18015	0.22	-1.1
3,895,552	+		RR42_RS18015	0.22	-0.1
3,895,553	-		RR42_RS18015	0.22	-1.0
3,895,553	-		RR42_RS18015	0.22	+0.7
3,895,553	-		RR42_RS18015	0.22	+0.8
3,895,553	-		RR42_RS18015	0.22	+0.5
3,895,573	+		RR42_RS18015	0.24	+1.5
3,895,666	+		RR42_RS18015	0.34	+0.3
3,895,667	-		RR42_RS18015	0.34	+0.1
3,895,687	+		RR42_RS18015	0.37	-1.7
3,895,723	+		RR42_RS18015	0.41	+0.8
3,895,723	+		RR42_RS18015	0.41	+0.3
3,895,723	+		RR42_RS18015	0.41	+1.5
3,895,724	-		RR42_RS18015	0.41	-0.6
3,896,030	+		RR42_RS18015	0.75	-0.3
3,896,031	-		RR42_RS18015	0.75	+0.4
3,896,031	-		RR42_RS18015	0.75	+0.2
3,896,116	+		RR42_RS18015	0.84	+0.4
3,896,117	-		RR42_RS18015	0.84	+0.1
3,896,231	+				-0.3
3,896,231	+				-0.1
3,896,231	+				-0.2
3,896,231	+				-0.1
3,896,232	-				+0.3
3,896,232	-				+1.1
3,896,232	-				+0.0
3,896,232	-				-0.3
3,896,232	-				-0.3
3,896,361	+				+1.5
3,896,362	-				-0.3
3,896,362	-				+0.4
3,896,371	-				-0.1
3,896,392	-				+0.7
3,896,640	+		RR42_RS18020	0.23	-1.0
3,896,640	+		RR42_RS18020	0.23	-2.2
3,896,640	+		RR42_RS18020	0.23	+0.0
3,896,641	-		RR42_RS18020	0.23	-0.5
3,896,947	-		RR42_RS18020	0.48	+0.0
3,897,019	+		RR42_RS18020	0.54	+3.5
3,897,245	+		RR42_RS18020	0.72	-3.4
3,897,602	-				+0.2
3,897,602	-				-0.5
3,897,723	-				+1.2
3,897,908	+				+0.0
3,897,909	-				-1.1