Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17795

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
3,848,630	+		RR42_RS17790	0.39	+0.2
3,848,675	-		RR42_RS17790	0.42	+0.1
3,848,852	-		RR42_RS17790	0.55	+1.5
3,848,864	-		RR42_RS17790	0.56	-0.7
3,848,864	-		RR42_RS17790	0.56	+0.5
3,849,325	-		RR42_RS17790	0.89	-0.6
3,849,455	-				+0.1
3,849,455	-				-0.1
3,849,457	+				-0.2
3,849,457	+				+0.1
3,849,457	+				-0.2
3,849,458	-				-0.6
3,849,519	+				+1.3
3,849,520	-				-1.4
3,849,524	-				-0.4
3,849,524	-				+0.2
3,849,524	-				-0.4
3,849,766	+		RR42_RS17795	0.19	+0.0
3,849,766	+		RR42_RS17795	0.19	-0.5
3,849,767	-		RR42_RS17795	0.19	+1.4
3,849,767	-		RR42_RS17795	0.19	-0.5
3,849,767	-		RR42_RS17795	0.19	+0.3
3,849,847	+		RR42_RS17795	0.28	+0.3
3,849,931	+		RR42_RS17795	0.38	+0.5
3,849,932	-		RR42_RS17795	0.39	+0.9
3,850,015	+		RR42_RS17795	0.49	+0.2
3,850,016	-		RR42_RS17795	0.49	+0.6
3,850,048	-		RR42_RS17795	0.53	+0.5
3,850,086	-		RR42_RS17795	0.57	+0.3
3,850,105	+		RR42_RS17795	0.59	+0.0
3,850,105	+		RR42_RS17795	0.59	+0.5
3,850,106	-		RR42_RS17795	0.59	-0.3
3,850,106	-		RR42_RS17795	0.59	+0.5
3,850,106	-		RR42_RS17795	0.59	+0.4
3,850,106	-		RR42_RS17795	0.59	-0.1
3,850,180	+		RR42_RS17795	0.68	+1.3
3,850,181	-		RR42_RS17795	0.68	+0.2
3,850,482	+				+0.9
3,850,675	-		RR42_RS17800	0.15	+1.3
3,850,709	+		RR42_RS17800	0.17	+0.7
3,850,709	+		RR42_RS17800	0.17	+0.5
3,850,874	+		RR42_RS17800	0.29	-2.7
3,850,875	-		RR42_RS17800	0.29	+0.9
3,850,938	+		RR42_RS17800	0.33	+0.9
3,850,993	+		RR42_RS17800	0.37	-1.6
3,851,007	+		RR42_RS17800	0.38	-0.3
3,851,007	+		RR42_RS17800	0.38	+1.5
3,851,007	+		RR42_RS17800	0.38	-0.6
3,851,007	+		RR42_RS17800	0.38	-0.2
3,851,008	-		RR42_RS17800	0.38	-0.1
3,851,008	-		RR42_RS17800	0.38	+1.1
3,851,009	+		RR42_RS17800	0.38	+1.5
3,851,009	+		RR42_RS17800	0.38	+0.6
3,851,010	-		RR42_RS17800	0.38	+0.2
3,851,334	+		RR42_RS17800	0.61	-0.2
3,851,427	+		RR42_RS17800	0.68	+0.0
3,851,428	-		RR42_RS17800	0.68	+0.7