Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16930

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
3,663,876	+				-0.5
3,663,877	-				+0.2
3,663,877	-				+1.0
3,663,877	-				-0.5
3,663,877	-				-0.3
3,663,877	-				+0.3
3,663,877	-				+0.4
3,664,013	-		RR42_RS16925	0.27	+1.1
3,664,033	+		RR42_RS16925	0.30	-0.3
3,664,108	+		RR42_RS16925	0.40	-1.1
3,664,109	-		RR42_RS16925	0.40	-0.5
3,664,109	-		RR42_RS16925	0.40	-0.0
3,664,252	+		RR42_RS16925	0.58	+0.7
3,664,252	+		RR42_RS16925	0.58	-0.2
3,664,253	-		RR42_RS16925	0.58	-1.0
3,664,253	-		RR42_RS16925	0.58	+0.4
3,664,498	+				-0.3
3,664,498	+				+0.4
3,664,499	-				+0.3
3,664,516	+				+0.3
3,664,517	-				+0.0
3,664,681	+		RR42_RS16930	0.12	-0.9
3,664,681	+		RR42_RS16930	0.12	+0.3
3,664,682	-		RR42_RS16930	0.12	+0.9
3,665,113	+		RR42_RS16930	0.67	+1.6
3,665,113	+		RR42_RS16930	0.67	+1.2
3,665,114	-		RR42_RS16930	0.67	+0.7
3,665,506	+		RR42_RS16935	0.16	-0.1
3,665,506	+		RR42_RS16935	0.16	-0.7
3,665,506	+		RR42_RS16935	0.16	-0.9
3,665,506	+		RR42_RS16935	0.16	-0.8
3,665,507	-		RR42_RS16935	0.16	-0.3
3,665,507	-		RR42_RS16935	0.16	+0.1
3,665,553	+		RR42_RS16935	0.21	+2.4
3,665,553	+		RR42_RS16935	0.21	-0.9
3,665,554	-		RR42_RS16935	0.22	-0.3
3,665,554	-		RR42_RS16935	0.22	+0.4
3,665,554	-		RR42_RS16935	0.22	+0.3
3,665,554	-		RR42_RS16935	0.22	+0.5
3,665,554	-		RR42_RS16935	0.22	+0.5
3,665,554	-		RR42_RS16935	0.22	+0.5
3,665,661	+		RR42_RS16935	0.34	+0.2
3,665,662	-		RR42_RS16935	0.34	+1.2
3,665,820	+		RR42_RS16935	0.52	+0.0
3,665,869	-		RR42_RS16935	0.58	-0.5
3,665,939	+		RR42_RS16935	0.66	+0.0
3,665,940	-		RR42_RS16935	0.66	+0.0
3,665,971	-		RR42_RS16935	0.69	+0.2
3,665,981	+		RR42_RS16935	0.70	-0.4
3,665,981	+		RR42_RS16935	0.70	-0.8
3,665,981	+		RR42_RS16935	0.70	+0.3
3,665,981	+		RR42_RS16935	0.70	+0.7
3,665,982	-		RR42_RS16935	0.71	-0.8
3,665,982	-		RR42_RS16935	0.71	+0.5
3,665,982	-		RR42_RS16935	0.71	-0.2
3,666,253	+				-0.8
3,666,253	+				-0.1
3,666,254	-				+0.1
3,666,275	-				+1.8