Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15655

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
3,379,206	+		RR42_RS15650	0.24	-1.7
3,379,206	+		RR42_RS15650	0.24	+0.7
3,379,207	-		RR42_RS15650	0.25	+0.6
3,379,280	+		RR42_RS15650	0.31	+0.3
3,379,281	-		RR42_RS15650	0.31	-0.3
3,379,334	+		RR42_RS15650	0.36	+0.4
3,379,760	+		RR42_RS15650	0.73	+0.4
3,379,899	-		RR42_RS15650	0.85	+2.1
3,379,899	-		RR42_RS15650	0.85	+0.9
3,379,899	-		RR42_RS15650	0.85	+1.8
3,380,066	+				+0.2
3,380,165	+				+0.6
3,380,166	-				-0.0
3,380,231	+				+0.5
3,380,333	+				-0.1
3,380,334	-				+0.0
3,380,334	-				-0.1
3,380,498	+		RR42_RS15655	0.13	+0.0
3,380,499	-		RR42_RS15655	0.13	+0.4
3,381,218	+		RR42_RS15655	0.35	-0.3
3,381,218	+		RR42_RS15655	0.35	+0.7
3,381,218	+		RR42_RS15655	0.35	+0.8
3,381,218	+		RR42_RS15655	0.35	+0.4
3,381,219	-		RR42_RS15655	0.35	+0.6
3,381,219	-		RR42_RS15655	0.35	-0.2
3,381,219	-		RR42_RS15655	0.35	+0.7
3,381,219	-		RR42_RS15655	0.35	-0.1
3,381,219	-		RR42_RS15655	0.35	+0.2
3,381,900	-		RR42_RS15655	0.57	-0.7
3,381,905	+		RR42_RS15655	0.57	+0.0
3,382,355	+		RR42_RS15655	0.71	-0.1
3,382,355	+		RR42_RS15655	0.71	-0.0
3,382,356	-		RR42_RS15655	0.71	+0.2
3,382,356	-		RR42_RS15655	0.71	-0.5
3,382,634	+		RR42_RS15655	0.80	-0.2
3,382,635	-		RR42_RS15655	0.80	+0.0
3,382,724	+		RR42_RS15655	0.82	+0.4
3,382,725	-		RR42_RS15655	0.82	+0.6
3,382,725	-		RR42_RS15655	0.82	+0.8
3,382,725	-		RR42_RS15655	0.82	+0.2
3,383,031	+				-0.3
3,383,031	+				-0.2
3,383,031	+				+0.2
3,383,159	+				+0.1
3,383,160	-				+1.3
3,383,160	-				-0.1
3,383,161	+				+0.5
3,383,161	+				+0.7
3,383,162	-				-0.6
3,383,162	-				+0.3
3,383,162	-				-0.6
3,383,162	-				+0.7
3,383,162	-				+0.5
3,383,165	+				+0.1
3,383,165	+				+0.0
3,383,166	-				+1.1
3,383,166	-				-0.7
3,383,166	-				-0.1
3,383,323	-				-2.0
3,383,415	-				-0.5
3,383,419	+				+0.6
3,383,419	+				-1.0
3,383,419	+				+0.5
3,383,479	+				+0.2
3,384,184	-				+1.4
3,384,184	-				+0.3
3,384,252	+		RR42_RS15665	0.23	-0.5