Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13125
Experiment: R2A with D-Cycloserine 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with D-Cycloserine 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,828,134 | - | RR42_RS13125 | 0.13 | -0.3 | |
2,828,138 | - | RR42_RS13125 | 0.13 | -1.7 | |
2,828,138 | - | RR42_RS13125 | 0.13 | -0.4 | |
2,828,147 | - | RR42_RS13125 | 0.14 | -1.1 | |
2,828,201 | - | RR42_RS13125 | 0.19 | -1.2 | |
2,828,618 | - | RR42_RS13125 | 0.56 | -3.0 | |
2,828,618 | - | RR42_RS13125 | 0.56 | +1.1 | |
2,828,921 | - | RR42_RS13125 | 0.83 | -0.2 | |
2,829,435 | - | RR42_RS13130 | 0.24 | -0.0 | |
2,829,615 | - | RR42_RS13130 | 0.52 | -0.5 | |
2,829,747 | - | RR42_RS13130 | 0.73 | -0.9 | |
2,829,747 | - | RR42_RS13130 | 0.73 | -0.5 | |
2,829,909 | - | +0.9 | |||
2,829,944 | - | -0.6 |
Or see this region's nucleotide sequence