Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12925

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
2,777,352	-		RR42_RS12920	0.73	+0.3
2,777,353	+		RR42_RS12920	0.73	+0.4
2,777,354	-		RR42_RS12920	0.73	-0.2
2,777,354	-		RR42_RS12920	0.73	-0.1
2,777,354	-		RR42_RS12920	0.73	+1.6
2,777,354	-		RR42_RS12920	0.73	+0.1
2,777,368	+		RR42_RS12920	0.74	+0.4
2,777,368	+		RR42_RS12920	0.74	-0.1
2,777,369	-		RR42_RS12920	0.74	+0.6
2,777,369	-		RR42_RS12920	0.74	+1.1
2,777,482	+		RR42_RS12920	0.78	-0.4
2,777,709	+		RR42_RS12920	0.87	+0.6
2,777,725	+		RR42_RS12920	0.88	-2.1
2,777,801	-				-0.6
2,777,801	-				-0.5
2,778,067	-				+0.5
2,778,067	-				+0.0
2,778,067	-				-0.7
2,778,067	-				-0.1
2,778,067	-				+1.4
2,778,095	-				+0.6
2,778,095	-				+0.0
2,778,143	+				-0.2
2,778,144	-				-0.1
2,778,144	-				-0.8
2,778,317	-		RR42_RS12925	0.15	-1.0
2,778,401	+		RR42_RS12925	0.23	-1.1
2,778,461	+		RR42_RS12925	0.29	+0.9
2,779,012	+		RR42_RS12925	0.79	-1.5
2,779,147	+				-1.6
2,779,225	+				-1.4
2,779,226	-				-0.9
2,779,226	-				+0.1
2,779,378	+				+0.3
2,779,378	+				-1.3
2,779,378	+				+0.1
2,779,379	-				-0.5
2,779,389	-				+0.0
2,779,389	-				-0.6
2,779,395	+				-0.2
2,779,396	-				-0.9
2,779,396	-				+0.1
2,779,396	-				+0.0
2,779,396	-				+0.2
2,779,396	-				+1.4
2,779,400	-				+1.0
2,779,400	-				-0.6