Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11765

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
2,515,740	-		RR42_RS11755	0.80	-0.5
2,515,786	+		RR42_RS11755	0.85	+1.0
2,515,786	+		RR42_RS11755	0.85	-1.0
2,515,787	-		RR42_RS11755	0.85	-0.8
2,515,927	-				-0.5
2,516,041	+				+0.1
2,516,042	-				-0.5
2,516,171	-		RR42_RS11760	0.21	-0.0
2,516,171	-		RR42_RS11760	0.21	+1.0
2,516,171	-		RR42_RS11760	0.21	+1.0
2,516,171	-		RR42_RS11760	0.21	-0.3
2,516,494	+		RR42_RS11760	0.77	+1.7
2,516,494	+		RR42_RS11760	0.77	-0.5
2,516,495	-		RR42_RS11760	0.77	-0.7
2,516,495	-		RR42_RS11760	0.77	-0.4
2,516,495	-		RR42_RS11760	0.77	-0.1
2,516,761	+		RR42_RS11765	0.30	-1.2
2,516,953	+		RR42_RS11765	0.85	-1.7
2,516,953	+		RR42_RS11765	0.85	-0.0
2,517,011	+				+1.0
2,517,012	-				-0.7
2,517,114	-		RR42_RS11770	0.26	-2.2
2,517,383	+		RR42_RS11770	0.88	-2.4
2,517,383	+		RR42_RS11770	0.88	-0.5
2,517,421	-				-2.7
2,517,421	-				-2.5
2,517,438	-				+0.2
2,517,438	-				+0.1
2,517,438	-				-1.5
2,517,438	-				-0.1
2,517,438	-				+0.1
2,517,643	+				+0.2