Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10505

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
2,244,982	+				+1.4
2,244,982	+				-0.4
2,244,988	+				-0.4
2,245,137	+		RR42_RS10500	0.75	-0.1
2,245,149	+		RR42_RS10500	0.81	+0.4
2,245,149	+		RR42_RS10500	0.81	-0.4
2,245,150	-		RR42_RS10500	0.82	+0.1
2,245,449	+				+0.1
2,245,449	+				-0.3
2,245,449	+				+0.0
2,245,449	+				+0.1
2,245,449	+				+2.0
2,245,449	+				-0.4
2,245,449	+				+0.3
2,245,449	+				+0.4
2,245,450	-				-0.5
2,245,450	-				+0.4
2,245,450	-				+0.5
2,245,472	-				+0.9
2,245,520	+				-1.4
2,245,521	-				+0.4
2,245,529	+				-0.8
2,245,530	-				+0.6
2,245,530	-				+0.3
2,245,530	-				+0.3
2,245,530	-				-0.5
2,245,535	+				-0.4
2,245,574	+				+0.3
2,245,574	+				-0.0
2,245,574	+				+0.1
2,245,574	+				-0.4
2,245,574	+				+0.1
2,245,575	-				+0.2
2,245,575	-				+1.1
2,245,575	-				-0.3
2,245,575	-				+0.5
2,245,654	+				+0.2
2,245,655	-				+0.6
2,245,655	-				-0.1
2,245,665	+				+1.4
2,245,666	-				-0.1
2,245,666	-				+0.4
2,245,686	+				+0.1
2,245,686	+				-0.0
2,245,687	-				+1.2
2,245,687	-				-0.6
2,245,687	-				-1.2
2,245,731	+				-0.3
2,245,732	-				-0.2
2,245,857	-				-1.4
2,245,883	+				-0.6
2,245,932	+				+1.3
2,245,932	+				-0.3
2,245,932	+				-0.2
2,246,000	+		RR42_RS10505	0.13	+0.5
2,246,000	+		RR42_RS10505	0.13	+0.9
2,246,000	+		RR42_RS10505	0.13	-0.1
2,246,001	-		RR42_RS10505	0.13	+0.7
2,246,001	-		RR42_RS10505	0.13	+0.9
2,246,144	+		RR42_RS10505	0.25	-0.3
2,246,144	+		RR42_RS10505	0.25	+0.5
2,246,144	+		RR42_RS10505	0.25	+0.4
2,246,729	+		RR42_RS10505	0.76	-0.2
2,246,730	-		RR42_RS10505	0.77	+0.3
2,246,923	+				+0.2
2,246,923	+				-0.0
2,246,924	-				-0.1
2,246,924	-				-0.1
2,246,927	+				-0.6
2,246,927	+				-0.7
2,246,927	+				-1.0
2,246,927	+				-0.0
2,246,927	+				-0.2
2,246,927	+				-1.1
2,246,927	+				-0.1
2,246,927	+				+0.7
2,246,928	-				+0.4
2,246,928	-				+0.5
2,246,928	-				-0.7
2,246,933	+				-0.3
2,247,067	+				+0.6
2,247,068	-				+0.6
2,247,174	+				+1.3
2,247,175	-				-0.1
2,247,175	-				-0.1
2,247,190	-				-0.3
2,247,266	+		RR42_RS10510	0.17	-0.7
2,247,358	-		RR42_RS10510	0.27	-0.9
2,247,358	-		RR42_RS10510	0.27	+0.1
2,247,631	-		RR42_RS10510	0.55	-0.1
2,247,632	+		RR42_RS10510	0.55	-0.0
2,247,633	-		RR42_RS10510	0.55	+0.8