Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08225

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
1,744,965	-		RR42_RS08220	0.19	-1.1
1,745,011	+		RR42_RS08220	0.39	+0.6
1,745,043	-		RR42_RS08220	0.53	+0.3
1,745,156	+				-0.5
1,745,157	-				+0.7
1,745,185	+				-1.2
1,745,302	+				+0.0
1,745,371	-				-0.6
1,745,399	+				+0.7
1,745,399	+				+1.0
1,745,556	-				+0.4
1,745,645	+				-1.2
1,745,646	-				-0.2
1,745,789	+				+0.0
1,745,790	-				+0.5
1,745,834	+				+0.1
1,745,834	+				+0.3
1,745,835	-				+0.0
1,745,920	-				-0.5
1,745,977	+				-1.0
1,746,218	-		RR42_RS08225	0.22	-1.1
1,746,315	-		RR42_RS08225	0.29	-0.3
1,746,931	+		RR42_RS08225	0.73	-2.2
1,746,931	+		RR42_RS08225	0.73	-0.7
1,747,108	+		RR42_RS08225	0.86	-0.1
1,747,109	-		RR42_RS08225	0.86	-0.7
1,747,280	+				+0.6
1,747,280	+				-0.1
1,747,300	+				-2.5
1,747,308	-				+0.5
1,747,727	+				-2.3
1,747,893	+		RR42_RS08235	0.14	-0.1
1,747,995	+		RR42_RS08235	0.22	-0.4
1,748,274	+		RR42_RS08235	0.43	+0.0
1,748,294	+		RR42_RS08235	0.45	-0.6