Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07620

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
1,631,926	+		RR42_RS07615	0.62	-0.7
1,631,926	+		RR42_RS07615	0.62	+0.4
1,631,927	-		RR42_RS07615	0.62	-0.3
1,632,324	+				+0.0
1,632,401	+				-0.1
1,632,401	+				-0.1
1,632,442	+				+0.3
1,632,492	+				-0.5
1,632,492	+				-0.6
1,632,492	+				-0.3
1,632,493	-				-1.3
1,632,541	+				-0.7
1,632,541	+				-0.0
1,632,667	+		RR42_RS07620	0.11	-1.2
1,632,688	+		RR42_RS07620	0.15	-1.2
1,632,689	-		RR42_RS07620	0.15	+0.0
1,632,866	-		RR42_RS07620	0.47	-1.4
1,632,898	+		RR42_RS07620	0.53	-0.8
1,632,898	+		RR42_RS07620	0.53	-1.0
1,632,967	+		RR42_RS07620	0.65	-1.1
1,632,967	+		RR42_RS07620	0.65	+0.5
1,632,968	-		RR42_RS07620	0.65	+0.4
1,632,993	+		RR42_RS07620	0.70	+0.0
1,632,994	-		RR42_RS07620	0.70	+0.1
1,633,051	+		RR42_RS07620	0.80	-0.3
1,633,051	+		RR42_RS07620	0.80	-0.6
1,633,052	-		RR42_RS07620	0.81	-1.7
1,633,157	-				-0.2
1,633,157	-				+0.8
1,633,379	-				+0.3
1,633,520	+				-0.6
1,633,520	+				-0.1
1,633,563	+				+0.6
1,633,563	+				-0.1
1,633,564	-				+0.4
1,633,564	-				+0.4
1,633,599	+				-0.3
1,633,599	+				+0.3
1,633,599	+				+0.4
1,633,659	+		RR42_RS07625	0.14	+0.7
1,633,697	+		RR42_RS07625	0.18	+0.1
1,633,778	+		RR42_RS07625	0.26	-1.3
1,633,779	-		RR42_RS07625	0.26	-0.4
1,634,137	+		RR42_RS07625	0.63	+0.1
1,634,138	-		RR42_RS07625	0.63	-0.8