Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07245

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
1,543,249	+				-0.0
1,543,249	+				+0.5
1,543,283	+				-0.3
1,543,321	+				+0.7
1,543,339	+				-0.3
1,543,339	+				-0.2
1,543,340	-				-0.6
1,543,346	-				+0.0
1,543,353	-				+1.3
1,543,431	+				-0.6
1,543,661	+				+0.0
1,543,661	+				+0.2
1,543,943	+		RR42_RS07240	0.61	+0.9
1,543,944	-		RR42_RS07240	0.61	+0.2
1,544,041	-				+0.7
1,544,103	-				+0.6
1,544,214	+				-0.3
1,544,214	+				-0.6
1,544,219	+				+0.3
1,544,225	+				-0.5
1,544,226	-				+2.1
1,544,381	-		RR42_RS07245	0.52	+1.3
1,544,420	-		RR42_RS07245	0.65	+0.7
1,544,536	+				-0.2
1,544,783	-				-0.7
1,544,834	+				+1.1
1,544,834	+				-0.3
1,544,834	+				+0.1
1,544,834	+				-1.1
1,544,834	+				+0.6
1,544,835	-				-0.3
1,544,835	-				-0.4
1,544,894	-		RR42_RS07255	0.13	+0.8
1,544,894	-		RR42_RS07255	0.13	+0.0
1,545,097	+				-0.1
1,545,134	-				-0.5
1,545,175	+				-0.5
1,545,175	+				-0.3
1,545,175	+				-2.4
1,545,175	+				+1.2
1,545,176	-				+0.4
1,545,176	-				-1.3
1,545,176	-				+0.5
1,545,407	+		RR42_RS07260	0.54	-0.8
1,545,407	+		RR42_RS07260	0.54	-0.1
1,545,407	+		RR42_RS07260	0.54	-0.1
1,545,407	+		RR42_RS07260	0.54	-0.5
1,545,407	+		RR42_RS07260	0.54	+0.3
1,545,408	-		RR42_RS07260	0.54	+1.1
1,545,408	-		RR42_RS07260	0.54	-1.5
1,545,420	-		RR42_RS07260	0.57	+0.0