Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07045

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
1,509,720	+		RR42_RS07035	0.51	+0.8
1,509,805	+		RR42_RS07035	0.63	+0.2
1,509,885	+		RR42_RS07035	0.75	+0.1
1,509,885	+		RR42_RS07035	0.75	-0.6
1,510,056	-				-1.9
1,510,056	-				+0.1
1,510,059	-				-0.1
1,510,109	+				-0.5
1,510,109	+				-1.7
1,510,109	+				-0.4
1,510,110	-				-0.2
1,510,110	-				+0.9
1,510,120	+				+0.8
1,510,121	-				-1.1
1,510,121	-				+0.7
1,510,210	+		RR42_RS07040	0.24	+0.1
1,510,242	+		RR42_RS07040	0.30	-0.1
1,510,371	-		RR42_RS07040	0.53	-0.5
1,510,371	-		RR42_RS07040	0.53	-0.6
1,510,560	-		RR42_RS07040	0.87	-0.9
1,510,585	-				+0.7
1,510,686	-		RR42_RS07045	0.13	-0.6
1,511,024	+				+0.6
1,511,024	+				+1.1
1,511,024	+				+0.2
1,511,024	+				+0.2
1,511,025	-				+0.1
1,511,025	-				-0.4
1,511,178	-				-0.0
1,511,285	+		RR42_RS07050	0.22	-0.4
1,511,472	-		RR42_RS07050	0.53	-1.0
1,511,547	+		RR42_RS07050	0.66	-0.2
1,511,547	+		RR42_RS07050	0.66	-0.4
1,511,548	-		RR42_RS07050	0.66	+0.4
1,511,585	+		RR42_RS07050	0.72	-0.1
1,511,585	+		RR42_RS07050	0.72	+0.2
1,511,681	-		RR42_RS07050	0.88	-0.1
1,511,681	-		RR42_RS07050	0.88	-0.1
1,511,681	-		RR42_RS07050	0.88	+0.0
1,511,681	-		RR42_RS07050	0.88	-0.2
1,511,681	-		RR42_RS07050	0.88	-0.8
1,511,725	+				-0.3
1,511,785	+				+1.4
1,511,786	-				-0.8
1,511,788	+				-1.6
1,511,789	-				-0.9
1,511,881	-				+0.2