Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06730

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
1,460,780	-				+0.2
1,460,806	+				+0.1
1,460,883	+				-0.1
1,460,883	+				+0.4
1,460,884	-				+1.0
1,460,884	-				-0.3
1,460,884	-				+0.2
1,461,001	-		RR42_RS06725	0.14	+0.2
1,461,001	-		RR42_RS06725	0.14	+0.7
1,461,083	-		RR42_RS06725	0.27	-0.0
1,461,196	-		RR42_RS06725	0.44	-0.3
1,461,234	+		RR42_RS06725	0.50	+0.1
1,461,235	-		RR42_RS06725	0.50	+1.8
1,461,248	-		RR42_RS06725	0.52	-2.6
1,461,248	-		RR42_RS06725	0.52	-0.2
1,461,305	-		RR42_RS06725	0.60	+1.7
1,461,305	-		RR42_RS06725	0.60	+0.1
1,461,305	-		RR42_RS06725	0.60	-0.2
1,461,582	-				-0.9
1,461,582	-				+0.4
1,461,582	-				+0.6
1,461,681	-				-1.0
1,461,803	+		RR42_RS06730	0.15	-0.9
1,461,803	+		RR42_RS06730	0.15	+0.2
1,461,804	-		RR42_RS06730	0.15	-1.5
1,461,944	+		RR42_RS06730	0.32	-0.7
1,461,944	+		RR42_RS06730	0.32	-0.7
1,461,945	-		RR42_RS06730	0.32	-1.1
1,462,093	-		RR42_RS06730	0.49	-0.7
1,462,154	+		RR42_RS06730	0.57	-0.0
1,462,184	+		RR42_RS06730	0.60	-0.7
1,462,185	-		RR42_RS06730	0.60	-0.8
1,462,425	-		RR42_RS06730	0.89	-0.7
1,462,529	+				+0.4
1,462,598	+		RR42_RS06735	0.48	+0.2
1,462,903	+				-0.5
1,462,990	-				+1.0
1,462,990	-				-0.7
1,463,003	+				-0.7
1,463,007	+				-0.3