Experiment: Chlorite 0.00005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3994 and Pf6N2E2_3995 are separated by 139 nucleotides Pf6N2E2_3995 and Pf6N2E2_3996 are separated by 100 nucleotides
Pf6N2E2_3994 - Ferrichrome-iron receptor, at 4,662,394 to 4,664,898
_3994
Pf6N2E2_3995 - Fatty acid desaturase, at 4,665,038 to 4,666,111
_3995
Pf6N2E2_3996 - Transcriptional regulator, AraC family, at 4,666,212 to 4,667,216
_3996
Position (kb)
4665
4666
4667 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4664.173 kb on + strand, within Pf6N2E2_3994 at 4664.173 kb on + strand, within Pf6N2E2_3994 at 4664.173 kb on + strand, within Pf6N2E2_3994 at 4664.173 kb on + strand, within Pf6N2E2_3994 at 4664.173 kb on + strand, within Pf6N2E2_3994 at 4664.174 kb on - strand, within Pf6N2E2_3994 at 4664.200 kb on + strand, within Pf6N2E2_3994 at 4664.200 kb on + strand, within Pf6N2E2_3994 at 4664.201 kb on - strand, within Pf6N2E2_3994 at 4664.209 kb on + strand, within Pf6N2E2_3994 at 4664.210 kb on - strand, within Pf6N2E2_3994 at 4664.303 kb on - strand, within Pf6N2E2_3994 at 4664.303 kb on - strand, within Pf6N2E2_3994 at 4664.303 kb on - strand, within Pf6N2E2_3994 at 4664.329 kb on + strand, within Pf6N2E2_3994 at 4664.330 kb on - strand, within Pf6N2E2_3994 at 4664.330 kb on - strand, within Pf6N2E2_3994 at 4664.396 kb on - strand, within Pf6N2E2_3994 at 4664.482 kb on + strand, within Pf6N2E2_3994 at 4664.482 kb on + strand, within Pf6N2E2_3994 at 4664.483 kb on - strand, within Pf6N2E2_3994 at 4664.483 kb on - strand, within Pf6N2E2_3994 at 4664.483 kb on - strand, within Pf6N2E2_3994 at 4664.523 kb on + strand, within Pf6N2E2_3994 at 4664.524 kb on - strand, within Pf6N2E2_3994 at 4664.524 kb on - strand, within Pf6N2E2_3994 at 4664.612 kb on - strand, within Pf6N2E2_3994 at 4664.666 kb on - strand at 4664.675 kb on - strand at 4664.717 kb on - strand at 4664.717 kb on - strand at 4664.717 kb on - strand at 4664.744 kb on - strand at 4664.815 kb on + strand at 4664.815 kb on + strand at 4664.816 kb on - strand at 4664.816 kb on - strand at 4664.848 kb on + strand at 4664.848 kb on + strand at 4664.849 kb on - strand at 4664.849 kb on - strand at 4664.849 kb on - strand at 4664.887 kb on + strand at 4664.897 kb on - strand at 4665.023 kb on + strand at 4665.024 kb on - strand at 4665.024 kb on - strand at 4665.024 kb on - strand at 4665.052 kb on + strand at 4665.186 kb on + strand, within Pf6N2E2_3995 at 4665.186 kb on + strand, within Pf6N2E2_3995 at 4665.187 kb on - strand, within Pf6N2E2_3995 at 4665.187 kb on - strand, within Pf6N2E2_3995 at 4665.187 kb on - strand, within Pf6N2E2_3995 at 4665.187 kb on - strand, within Pf6N2E2_3995 at 4665.324 kb on + strand, within Pf6N2E2_3995 at 4665.325 kb on - strand, within Pf6N2E2_3995 at 4665.325 kb on - strand, within Pf6N2E2_3995 at 4665.327 kb on + strand, within Pf6N2E2_3995 at 4665.328 kb on - strand, within Pf6N2E2_3995 at 4665.328 kb on - strand, within Pf6N2E2_3995 at 4665.328 kb on - strand, within Pf6N2E2_3995 at 4665.328 kb on - strand, within Pf6N2E2_3995 at 4665.328 kb on - strand, within Pf6N2E2_3995 at 4665.504 kb on + strand, within Pf6N2E2_3995 at 4665.504 kb on + strand, within Pf6N2E2_3995 at 4665.504 kb on + strand, within Pf6N2E2_3995 at 4665.504 kb on + strand, within Pf6N2E2_3995 at 4665.504 kb on + strand, within Pf6N2E2_3995 at 4665.504 kb on + strand, within Pf6N2E2_3995 at 4665.505 kb on - strand, within Pf6N2E2_3995 at 4665.505 kb on - strand, within Pf6N2E2_3995 at 4665.505 kb on - strand, within Pf6N2E2_3995 at 4665.505 kb on - strand, within Pf6N2E2_3995 at 4665.540 kb on + strand, within Pf6N2E2_3995 at 4665.540 kb on + strand, within Pf6N2E2_3995 at 4665.541 kb on - strand, within Pf6N2E2_3995 at 4665.541 kb on - strand, within Pf6N2E2_3995 at 4665.574 kb on + strand, within Pf6N2E2_3995 at 4665.575 kb on - strand, within Pf6N2E2_3995 at 4665.825 kb on + strand, within Pf6N2E2_3995 at 4665.825 kb on + strand, within Pf6N2E2_3995 at 4665.825 kb on + strand, within Pf6N2E2_3995 at 4665.825 kb on + strand, within Pf6N2E2_3995 at 4665.825 kb on + strand, within Pf6N2E2_3995 at 4665.826 kb on - strand, within Pf6N2E2_3995 at 4665.826 kb on - strand, within Pf6N2E2_3995 at 4665.912 kb on + strand, within Pf6N2E2_3995 at 4665.924 kb on + strand, within Pf6N2E2_3995 at 4665.925 kb on - strand, within Pf6N2E2_3995 at 4665.925 kb on - strand, within Pf6N2E2_3995 at 4665.925 kb on - strand, within Pf6N2E2_3995 at 4665.925 kb on - strand, within Pf6N2E2_3995 at 4666.041 kb on - strand at 4666.054 kb on + strand at 4666.116 kb on + strand at 4666.116 kb on + strand at 4666.116 kb on + strand at 4666.116 kb on + strand at 4666.116 kb on + strand at 4666.116 kb on + strand at 4666.116 kb on + strand at 4666.116 kb on + strand at 4666.117 kb on - strand at 4666.117 kb on - strand at 4666.117 kb on - strand at 4666.117 kb on - strand at 4666.117 kb on - strand at 4666.117 kb on - strand at 4666.117 kb on - strand at 4666.117 kb on - strand at 4666.128 kb on + strand at 4666.129 kb on - strand at 4666.300 kb on + strand at 4666.301 kb on - strand at 4666.301 kb on - strand at 4666.651 kb on - strand, within Pf6N2E2_3996 at 4666.651 kb on - strand, within Pf6N2E2_3996 at 4666.651 kb on - strand, within Pf6N2E2_3996 at 4666.687 kb on - strand, within Pf6N2E2_3996 at 4666.704 kb on + strand, within Pf6N2E2_3996 at 4666.705 kb on - strand, within Pf6N2E2_3996 at 4666.878 kb on - strand, within Pf6N2E2_3996 at 4666.919 kb on - strand, within Pf6N2E2_3996 at 4666.919 kb on - strand, within Pf6N2E2_3996
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.00005 M remove 4,664,173 + Pf6N2E2_3994 0.71 +0.3 4,664,173 + Pf6N2E2_3994 0.71 -1.4 4,664,173 + Pf6N2E2_3994 0.71 +1.0 4,664,173 + Pf6N2E2_3994 0.71 -0.7 4,664,173 + Pf6N2E2_3994 0.71 -0.3 4,664,174 - Pf6N2E2_3994 0.71 +0.1 4,664,200 + Pf6N2E2_3994 0.72 +0.1 4,664,200 + Pf6N2E2_3994 0.72 +1.1 4,664,201 - Pf6N2E2_3994 0.72 +0.3 4,664,209 + Pf6N2E2_3994 0.72 +0.8 4,664,210 - Pf6N2E2_3994 0.72 -0.4 4,664,303 - Pf6N2E2_3994 0.76 -0.1 4,664,303 - Pf6N2E2_3994 0.76 +1.0 4,664,303 - Pf6N2E2_3994 0.76 +0.7 4,664,329 + Pf6N2E2_3994 0.77 -0.4 4,664,330 - Pf6N2E2_3994 0.77 -1.3 4,664,330 - Pf6N2E2_3994 0.77 -1.4 4,664,396 - Pf6N2E2_3994 0.80 +2.0 4,664,482 + Pf6N2E2_3994 0.83 -1.3 4,664,482 + Pf6N2E2_3994 0.83 +0.7 4,664,483 - Pf6N2E2_3994 0.83 -0.1 4,664,483 - Pf6N2E2_3994 0.83 -0.4 4,664,483 - Pf6N2E2_3994 0.83 +0.0 4,664,523 + Pf6N2E2_3994 0.85 +1.1 4,664,524 - Pf6N2E2_3994 0.85 +1.2 4,664,524 - Pf6N2E2_3994 0.85 -2.0 4,664,612 - Pf6N2E2_3994 0.89 -0.4 4,664,666 - -1.2 4,664,675 - -0.5 4,664,717 - -0.9 4,664,717 - -0.1 4,664,717 - +0.3 4,664,744 - -0.2 4,664,815 + +1.3 4,664,815 + -0.0 4,664,816 - -0.1 4,664,816 - -0.3 4,664,848 + -0.5 4,664,848 + +0.0 4,664,849 - +0.0 4,664,849 - +0.3 4,664,849 - +1.4 4,664,887 + +0.8 4,664,897 - +0.9 4,665,023 + +0.3 4,665,024 - +0.6 4,665,024 - +0.0 4,665,024 - -1.1 4,665,052 + -0.7 4,665,186 + Pf6N2E2_3995 0.14 +1.0 4,665,186 + Pf6N2E2_3995 0.14 +0.9 4,665,187 - Pf6N2E2_3995 0.14 +0.3 4,665,187 - Pf6N2E2_3995 0.14 +0.1 4,665,187 - Pf6N2E2_3995 0.14 +0.8 4,665,187 - Pf6N2E2_3995 0.14 +1.3 4,665,324 + Pf6N2E2_3995 0.27 +1.0 4,665,325 - Pf6N2E2_3995 0.27 -0.1 4,665,325 - Pf6N2E2_3995 0.27 +1.3 4,665,327 + Pf6N2E2_3995 0.27 +1.5 4,665,328 - Pf6N2E2_3995 0.27 +0.8 4,665,328 - Pf6N2E2_3995 0.27 -0.1 4,665,328 - Pf6N2E2_3995 0.27 +0.9 4,665,328 - Pf6N2E2_3995 0.27 +0.8 4,665,328 - Pf6N2E2_3995 0.27 +0.6 4,665,504 + Pf6N2E2_3995 0.43 -1.0 4,665,504 + Pf6N2E2_3995 0.43 +0.0 4,665,504 + Pf6N2E2_3995 0.43 +0.4 4,665,504 + Pf6N2E2_3995 0.43 +0.8 4,665,504 + Pf6N2E2_3995 0.43 +1.1 4,665,504 + Pf6N2E2_3995 0.43 +0.1 4,665,505 - Pf6N2E2_3995 0.43 +1.3 4,665,505 - Pf6N2E2_3995 0.43 -0.0 4,665,505 - Pf6N2E2_3995 0.43 +1.8 4,665,505 - Pf6N2E2_3995 0.43 +0.2 4,665,540 + Pf6N2E2_3995 0.47 +0.7 4,665,540 + Pf6N2E2_3995 0.47 +0.3 4,665,541 - Pf6N2E2_3995 0.47 -1.0 4,665,541 - Pf6N2E2_3995 0.47 +0.2 4,665,574 + Pf6N2E2_3995 0.50 -0.9 4,665,575 - Pf6N2E2_3995 0.50 +0.5 4,665,825 + Pf6N2E2_3995 0.73 -0.7 4,665,825 + Pf6N2E2_3995 0.73 -0.7 4,665,825 + Pf6N2E2_3995 0.73 +0.4 4,665,825 + Pf6N2E2_3995 0.73 -0.0 4,665,825 + Pf6N2E2_3995 0.73 -1.3 4,665,826 - Pf6N2E2_3995 0.73 +0.4 4,665,826 - Pf6N2E2_3995 0.73 +0.3 4,665,912 + Pf6N2E2_3995 0.81 +0.2 4,665,924 + Pf6N2E2_3995 0.82 +0.4 4,665,925 - Pf6N2E2_3995 0.83 +0.3 4,665,925 - Pf6N2E2_3995 0.83 +0.4 4,665,925 - Pf6N2E2_3995 0.83 -2.2 4,665,925 - Pf6N2E2_3995 0.83 +0.5 4,666,041 - -0.9 4,666,054 + -0.1 4,666,116 + -0.4 4,666,116 + -1.7 4,666,116 + -0.2 4,666,116 + +1.1 4,666,116 + +0.2 4,666,116 + -0.3 4,666,116 + -0.6 4,666,116 + -0.3 4,666,117 - -0.4 4,666,117 - +0.5 4,666,117 - -0.3 4,666,117 - +0.0 4,666,117 - -0.3 4,666,117 - -0.9 4,666,117 - -1.0 4,666,117 - +0.5 4,666,128 + +0.0 4,666,129 - +0.9 4,666,300 + +0.6 4,666,301 - +0.8 4,666,301 - +0.4 4,666,651 - Pf6N2E2_3996 0.44 +0.4 4,666,651 - Pf6N2E2_3996 0.44 +0.1 4,666,651 - Pf6N2E2_3996 0.44 +0.6 4,666,687 - Pf6N2E2_3996 0.47 -0.4 4,666,704 + Pf6N2E2_3996 0.49 -0.7 4,666,705 - Pf6N2E2_3996 0.49 +0.1 4,666,878 - Pf6N2E2_3996 0.66 -1.7 4,666,919 - Pf6N2E2_3996 0.70 -1.5 4,666,919 - Pf6N2E2_3996 0.70 -0.7
Or see this region's nucleotide sequence