Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_752

Experiment: Cytosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt Pf1N1B4_752 - hypothetical protein, at 855,142 to 855,273 _752 Position (kb) 855 856Strain fitness (log2 ratio) -2 -1 0 1 2at 854.213 kb on + strandat 854.300 kb on + strandat 854.300 kb on + strandat 854.361 kb on - strandat 854.421 kb on + strandat 854.422 kb on - strandat 854.422 kb on - strandat 854.434 kb on + strandat 854.435 kb on - strandat 854.435 kb on - strandat 854.438 kb on + strandat 854.547 kb on + strandat 854.547 kb on + strandat 854.598 kb on - strandat 854.656 kb on + strandat 854.657 kb on - strandat 854.801 kb on - strandat 854.864 kb on + strandat 854.865 kb on - strandat 854.915 kb on + strandat 854.958 kb on + strandat 854.959 kb on - strandat 854.959 kb on - strandat 854.959 kb on - strandat 854.998 kb on + strandat 854.999 kb on - strandat 854.999 kb on - strandat 855.002 kb on - strandat 855.002 kb on - strandat 855.002 kb on - strandat 855.213 kb on - strand, within Pf1N1B4_752at 855.354 kb on - strandat 855.354 kb on - strandat 855.354 kb on - strandat 855.354 kb on - strandat 855.379 kb on + strandat 855.379 kb on + strandat 855.380 kb on - strandat 855.380 kb on - strandat 855.380 kb on - strandat 855.380 kb on - strandat 855.380 kb on - strandat 855.380 kb on - strandat 855.436 kb on - strandat 855.446 kb on + strandat 855.447 kb on - strandat 855.447 kb on - strandat 855.454 kb on + strandat 855.455 kb on - strandat 855.455 kb on - strandat 855.498 kb on - strandat 855.543 kb on - strandat 855.543 kb on - strandat 855.543 kb on - strandat 855.578 kb on + strandat 855.579 kb on - strandat 855.579 kb on - strandat 855.606 kb on - strandat 855.707 kb on - strandat 855.766 kb on - strandat 855.958 kb on - strandat 856.114 kb on - strandat 856.114 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytosine (N)
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854,213 + -1.6
854,300 + -2.0
854,300 + +1.6
854,361 - +1.7
854,421 + -0.0
854,422 - -0.4
854,422 - +1.0
854,434 + -0.4
854,435 - +1.0
854,435 - +0.3
854,438 + -1.0
854,547 + +0.3
854,547 + +2.2
854,598 - -0.0
854,656 + +1.3
854,657 - +0.3
854,801 - +1.0
854,864 + +1.7
854,865 - -0.6
854,915 + +1.3
854,958 + -2.6
854,959 - -0.4
854,959 - -2.6
854,959 - -2.0
854,998 + +1.1
854,999 - +0.6
854,999 - +1.8
855,002 - -0.4
855,002 - +0.7
855,002 - +1.0
855,213 - Pf1N1B4_752 0.54 +0.2
855,354 - +1.8
855,354 - -0.0
855,354 - -0.7
855,354 - +0.1
855,379 + +1.0
855,379 + +0.6
855,380 - -0.4
855,380 - +0.6
855,380 - -0.3
855,380 - +1.0
855,380 - +2.0
855,380 - -1.0
855,436 - +0.5
855,446 + +2.2
855,447 - +0.4
855,447 - +0.6
855,454 + -0.4
855,455 - -0.4
855,455 - -0.1
855,498 - +1.0
855,543 - +1.6
855,543 - -1.0
855,543 - +0.6
855,578 + -0.0
855,579 - -0.5
855,579 - +0.6
855,606 - +1.8
855,707 - -0.6
855,766 - +1.8
855,958 - -0.2
856,114 - +0.4
856,114 - -0.0

Or see this region's nucleotide sequence