Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3032

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
3,411,683	-		Pf1N1B4_3031	0.78	+0.0
3,411,683	-		Pf1N1B4_3031	0.78	-0.2
3,411,711	+		Pf1N1B4_3031	0.79	-0.4
3,411,711	+		Pf1N1B4_3031	0.79	+0.7
3,411,711	+		Pf1N1B4_3031	0.79	+0.8
3,411,711	+		Pf1N1B4_3031	0.79	-0.6
3,411,711	+				-2.0
3,411,711	+		Pf1N1B4_3031	0.79	-1.0
3,411,711	+		Pf1N1B4_3031	0.79	-1.0
3,411,712	-		Pf1N1B4_3031	0.79	-2.3
3,411,712	-		Pf1N1B4_3031	0.79	+1.6
3,411,712	-		Pf1N1B4_3031	0.79	+0.2
3,411,712	-		Pf1N1B4_3031	0.79	+0.6
3,411,713	+		Pf1N1B4_3031	0.79	+0.8
3,411,740	+		Pf1N1B4_3031	0.80	+1.2
3,411,740	+		Pf1N1B4_3031	0.80	-1.0
3,411,741	-		Pf1N1B4_3031	0.80	-1.0
3,411,741	-		Pf1N1B4_3031	0.80	+1.3
3,411,743	+				+0.6
3,411,743	+		Pf1N1B4_3031	0.80	+0.5
3,411,744	-		Pf1N1B4_3031	0.80	+0.3
3,411,744	-		Pf1N1B4_3031	0.80	+1.0
3,411,775	+		Pf1N1B4_3031	0.81	+0.6
3,411,815	+		Pf1N1B4_3031	0.82	-1.0
3,411,819	+		Pf1N1B4_3031	0.83	+1.5
3,411,819	+		Pf1N1B4_3031	0.83	+0.6
3,411,820	-		Pf1N1B4_3031	0.83	-1.6
3,411,820	-		Pf1N1B4_3031	0.83	+0.8
3,411,820	-		Pf1N1B4_3031	0.83	+1.0
3,411,820	-		Pf1N1B4_3031	0.83	+1.2
3,411,820	-		Pf1N1B4_3031	0.83	+1.0
3,411,820	-		Pf1N1B4_3031	0.83	+0.0
3,411,820	-		Pf1N1B4_3031	0.83	+0.2
3,411,859	-				-2.0
3,411,889	+		Pf1N1B4_3031	0.85	-0.4
3,411,889	+		Pf1N1B4_3031	0.85	+2.6
3,411,890	-				+0.0
3,411,890	-		Pf1N1B4_3031	0.85	+1.6
3,411,890	-		Pf1N1B4_3031	0.85	+0.6
3,411,910	+		Pf1N1B4_3031	0.86	+0.6
3,411,911	-		Pf1N1B4_3031	0.86	+0.0
3,411,966	-		Pf1N1B4_3031	0.88	+1.7
3,411,997	+		Pf1N1B4_3031	0.89	+1.3
3,411,998	-		Pf1N1B4_3031	0.89	-1.0
3,412,012	+		Pf1N1B4_3031	0.90	-0.4
3,412,013	-		Pf1N1B4_3031	0.90	+2.0
3,412,022	+				-2.0
3,412,087	+				-0.6
3,412,087	+				+0.0
3,412,087	+				-1.0
3,412,087	+				-1.0
3,412,088	-				+1.3
3,412,088	-				+0.6
3,412,088	-				+0.2
3,412,107	+				+1.0
3,412,107	+				-1.0
3,412,107	+				-0.3
3,412,107	+				+2.1
3,412,107	+				+0.6
3,412,107	+				+1.0
3,412,107	+				+0.6
3,412,107	+				-1.0
3,412,108	-				+0.6
3,412,108	-				-0.3
3,412,108	-				-2.6
3,412,108	-				+0.6
3,412,108	-				+0.0
3,412,108	-				+0.2
3,412,108	-				+0.8
3,412,108	-				+0.8
3,412,108	-				-0.2
3,412,110	+				+2.3
3,412,151	+				-1.0
3,412,161	+				-0.4
3,412,161	+				+2.3
3,412,161	+				+0.2
3,412,162	-				-0.7
3,412,162	-				+0.6
3,412,277	-				+0.7
3,412,293	+				+1.8
3,412,296	+				-1.0
3,412,296	+				-0.7
3,412,297	-				-0.7
3,412,297	-				+0.0
3,412,297	-				+0.2
3,412,307	-				+0.6
3,412,309	+				-0.2
3,412,310	-				+0.3
3,412,383	+				+0.2
3,412,383	+				-0.3
3,412,384	-				+0.0
3,412,386	+				-1.4
3,412,386	+				+1.0
3,412,577	+				-1.6
3,412,578	-				-0.4
3,412,578	-				+0.0
3,412,605	+				+1.3
3,412,606	-				-0.6
3,412,795	+		Pf1N1B4_3032	0.34	+0.8
3,412,795	+		Pf1N1B4_3032	0.34	+0.9
3,412,795	+				+0.6
3,412,796	-		Pf1N1B4_3032	0.34	+0.3
3,412,828	+		Pf1N1B4_3032	0.39	-0.5
3,412,828	+		Pf1N1B4_3032	0.39	+1.0
3,412,828	+		Pf1N1B4_3032	0.39	-0.6
3,412,828	+		Pf1N1B4_3032	0.39	-0.8
3,412,828	+		Pf1N1B4_3032	0.39	+0.6
3,412,828	+		Pf1N1B4_3032	0.39	+1.7
3,412,828	+		Pf1N1B4_3032	0.39	+0.6
3,412,828	+		Pf1N1B4_3032	0.39	+0.6
3,412,829	-		Pf1N1B4_3032	0.39	+0.0
3,412,829	-		Pf1N1B4_3032	0.39	+0.3
3,412,829	-		Pf1N1B4_3032	0.39	+0.0
3,412,829	-		Pf1N1B4_3032	0.39	+0.6
3,412,829	-		Pf1N1B4_3032	0.39	+0.3
3,412,829	-		Pf1N1B4_3032	0.39	-1.0
3,412,837	+		Pf1N1B4_3032	0.40	+0.8
3,413,134	+		Pf1N1B4_3032	0.81	+0.0
3,413,134	+		Pf1N1B4_3032	0.81	-0.8
3,413,135	-		Pf1N1B4_3032	0.81	+0.5
3,413,135	-		Pf1N1B4_3032	0.81	+0.6
3,413,135	-		Pf1N1B4_3032	0.81	-0.7
3,413,135	-		Pf1N1B4_3032	0.81	-0.2
3,413,185	+		Pf1N1B4_3032	0.88	-1.0
3,413,185	+		Pf1N1B4_3032	0.88	+0.6
3,413,269	+				+3.0
3,413,270	-				+1.1
3,413,343	+				+0.6
3,413,343	+				+1.0
3,413,343	+				-1.0
3,413,343	+				-2.0
3,413,343	+				-0.7
3,413,343	+				+1.0
3,413,344	-				-3.0
3,413,344	-				-1.0
3,413,344	-				-2.0
3,413,344	-				+0.0
3,413,344	-				+2.2
3,413,344	-				+0.0
3,413,344	-				+1.0
3,413,344	-				+0.2
3,413,462	-				+0.2
3,413,513	+				+0.6
3,413,514	-				+1.8
3,413,514	-				+1.8
3,413,514	-				-1.0
3,413,700	+				+0.0
3,413,700	+				-1.0
3,413,700	+				+0.6
3,413,701	-				+0.0
3,413,701	-				-1.0
3,413,701	-				-1.6
3,413,701	-				+1.4
3,413,701	-				-1.0
3,413,701	-				-0.4
3,413,739	+		Pf1N1B4_3033	0.12	+0.6
3,413,739	+		Pf1N1B4_3033	0.12	-1.0
3,413,740	-		Pf1N1B4_3033	0.12	-1.6
3,413,740	-		Pf1N1B4_3033	0.12	+0.2
3,413,741	+		Pf1N1B4_3033	0.12	+0.0
3,413,741	+		Pf1N1B4_3033	0.12	+0.2
3,413,808	+		Pf1N1B4_3033	0.16	+0.3
3,413,808	+		Pf1N1B4_3033	0.16	-0.6
3,413,808	+		Pf1N1B4_3033	0.16	+0.2
3,413,808	+		Pf1N1B4_3033	0.16	-1.0
3,413,808	+		Pf1N1B4_3033	0.16	+0.6
3,413,808	+		Pf1N1B4_3033	0.16	-1.0
3,413,809	-		Pf1N1B4_3033	0.16	+0.2
3,413,809	-		Pf1N1B4_3033	0.16	+0.3
3,413,809	-		Pf1N1B4_3033	0.16	-1.0
3,413,847	+		Pf1N1B4_3033	0.18	+0.4
3,413,847	+		Pf1N1B4_3033	0.18	+2.0
3,413,848	-		Pf1N1B4_3033	0.18	+0.9
3,413,952	+		Pf1N1B4_3033	0.25	+0.8
3,413,952	+		Pf1N1B4_3033	0.25	-0.4
3,413,952	+		Pf1N1B4_3033	0.25	-1.0
3,413,968	-		Pf1N1B4_3033	0.26	+1.0
3,414,026	+		Pf1N1B4_3033	0.29	+1.0