Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1901

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
2,173,549	+				+0.9
2,173,550	-				-0.9
2,173,568	+				+0.3
2,173,568	+				+1.6
2,173,569	-				-0.7
2,173,620	-				-0.2
2,173,696	-				-0.1
2,173,696	-				-0.7
2,173,696	-				+0.3
2,173,705	-				+0.3
2,173,881	+		Pf1N1B4_1899	0.38	+0.0
2,173,882	-		Pf1N1B4_1899	0.38	+0.9
2,173,882	-		Pf1N1B4_1899	0.38	+0.9
2,173,914	-		Pf1N1B4_1899	0.46	+2.9
2,173,941	-		Pf1N1B4_1899	0.52	+0.9
2,174,056	+		Pf1N1B4_1899	0.81	+0.7
2,174,056	+		Pf1N1B4_1899	0.81	+1.3
2,174,056	+		Pf1N1B4_1899	0.81	+1.3
2,174,056	+		Pf1N1B4_1899	0.81	-0.4
2,174,057	-		Pf1N1B4_1899	0.81	+0.3
2,174,057	-		Pf1N1B4_1899	0.81	-2.0
2,174,057	-		Pf1N1B4_1899	0.81	-0.1
2,174,057	-		Pf1N1B4_1899	0.81	-0.1
2,174,228	+		Pf1N1B4_1900	0.29	-0.9
2,174,228	+		Pf1N1B4_1900	0.29	+1.8
2,174,228	+		Pf1N1B4_1900	0.29	+0.9
2,174,229	-		Pf1N1B4_1900	0.30	+1.6
2,174,229	-		Pf1N1B4_1900	0.30	+1.3
2,174,267	+		Pf1N1B4_1900	0.41	-0.2
2,174,267	+		Pf1N1B4_1900	0.41	-0.6
2,174,267	+		Pf1N1B4_1900	0.41	-0.0
2,174,268	-		Pf1N1B4_1900	0.42	+0.3
2,174,268	-		Pf1N1B4_1900	0.42	+0.1
2,174,268	-		Pf1N1B4_1900	0.42	+1.0
2,174,280	+		Pf1N1B4_1900	0.45	-0.7
2,174,280	+		Pf1N1B4_1900	0.45	+0.0
2,174,280	+		Pf1N1B4_1900	0.45	+1.3
2,174,280	+		Pf1N1B4_1900	0.45	-0.1
2,174,280	+		Pf1N1B4_1900	0.45	+1.6
2,174,280	+		Pf1N1B4_1900	0.45	+0.4
2,174,280	+		Pf1N1B4_1900	0.45	+1.2
2,174,280	+		Pf1N1B4_1900	0.45	+2.1
2,174,280	+		Pf1N1B4_1900	0.45	+0.4
2,174,280	+		Pf1N1B4_1900	0.45	+0.9
2,174,280	+		Pf1N1B4_1900	0.45	-0.2
2,174,280	+		Pf1N1B4_1900	0.45	+0.7
2,174,280	+		Pf1N1B4_1900	0.45	-0.1
2,174,281	-		Pf1N1B4_1900	0.46	-0.4
2,174,281	-		Pf1N1B4_1900	0.46	-1.3
2,174,281	-		Pf1N1B4_1900	0.46	-1.4
2,174,281	-		Pf1N1B4_1900	0.46	+1.5
2,174,281	-		Pf1N1B4_1900	0.46	-0.2
2,174,281	-		Pf1N1B4_1900	0.46	+0.9
2,174,281	-		Pf1N1B4_1900	0.46	+0.9
2,174,281	-		Pf1N1B4_1900	0.46	+1.2
2,174,281	-		Pf1N1B4_1900	0.46	+0.3
2,174,281	-		Pf1N1B4_1900	0.46	-1.9
2,174,281	-		Pf1N1B4_1900	0.46	-0.0
2,174,281	-		Pf1N1B4_1900	0.46	-0.2
2,174,281	-		Pf1N1B4_1900	0.46	+0.5
2,174,424	+		Pf1N1B4_1900	0.89	+1.3
2,174,424	+		Pf1N1B4_1900	0.89	+0.4
2,174,424	+		Pf1N1B4_1900	0.89	-0.3
2,174,424	+		Pf1N1B4_1900	0.89	+1.8
2,174,425	-		Pf1N1B4_1900	0.90	+1.0
2,174,425	-		Pf1N1B4_1900	0.90	+0.6
2,174,425	-		Pf1N1B4_1900	0.90	-0.4
2,174,439	+				+0.8
2,174,470	+				-0.5
2,174,475	+				+1.9
2,174,475	+				+1.5
2,174,475	+				+0.3
2,174,475	+				-0.3
2,174,475	+				+0.8
2,174,476	-				+0.3
2,174,476	-				+2.6
2,174,476	-				-1.7
2,174,476	-				-0.1
2,174,476	-				+1.1
2,174,476	-				+0.3
2,174,476	-				+1.0
2,174,514	+				+1.1
2,174,514	+				-0.1
2,174,514	+				+0.0
2,174,514	+				+3.2
2,174,514	+				+0.6
2,174,514	+				+1.0
2,174,514	+				-0.1
2,174,514	+				-0.7
2,174,514	+				+0.6
2,174,514	+				-0.8
2,174,515	-				-0.5
2,174,515	-				+1.3
2,174,515	-				+0.5
2,174,515	-				+0.9
2,174,515	-				+0.9
2,174,515	-				+0.9
2,174,515	-				-0.7
2,174,515	-				+0.7
2,174,515	-				-0.1
2,174,515	-				+0.5
2,174,515	-				+1.3
2,174,515	-				+1.3
2,174,515	-				-0.7
2,174,515	-				-0.1
2,174,515	-				+1.5
2,174,515	-				+1.4
2,174,515	-				+0.1
2,174,516	+				+0.7
2,174,516	+				-0.7
2,174,516	+				+0.3
2,174,517	-				-0.9
2,174,517	-				-0.7
2,174,517	-				+0.3
2,174,517	-				-0.3
2,174,517	-				+1.3
2,174,517	-				+0.5
2,174,517	-				-0.7
2,174,517	-				+0.0
2,174,518	+				+1.2
2,174,518	+				+0.8
2,174,518	+				-0.1
2,174,518	+				-0.1
2,174,518	+				+0.3
2,174,518	+				+1.8
2,174,518	+				-0.1
2,174,518	+				+0.6
2,174,519	-				+0.9
2,174,519	-				+1.0
2,174,519	-				+0.0
2,174,519	-				-0.4
2,174,519	-				-0.7
2,174,519	-				+1.6
2,174,529	+				+0.4
2,174,529	+				+1.6
2,174,529	+				-0.3
2,174,582	+				+1.4
2,174,583	-				+1.1
2,174,583	-				+0.5
2,174,597	-				+0.9
2,174,943	+		Pf1N1B4_1901	0.60	+0.3
2,174,943	+		Pf1N1B4_1901	0.60	+0.0
2,174,943	+		Pf1N1B4_1901	0.60	-0.0
2,174,943	+		Pf1N1B4_1901	0.60	-0.7
2,174,943	+		Pf1N1B4_1901	0.60	-0.7
2,174,943	+		Pf1N1B4_1901	0.60	-1.7
2,174,943	+		Pf1N1B4_1901	0.60	+0.4
2,174,943	+		Pf1N1B4_1901	0.60	-0.4
2,174,944	-		Pf1N1B4_1901	0.60	-0.3
2,174,944	-		Pf1N1B4_1901	0.60	-1.7
2,174,944	-		Pf1N1B4_1901	0.60	+0.6
2,175,080	-		Pf1N1B4_1901	0.81	-0.1
2,175,203	+				-0.2
2,175,204	-				+1.9
2,175,207	-				-0.7
2,175,207	-				-0.7
2,175,207	-				-1.4
2,175,244	-				-1.7
2,175,244	-				+0.9
2,175,276	+				+0.9
2,175,277	-				+1.5
2,175,373	+		Pf1N1B4_1902	0.10	+1.7
2,175,402	+		Pf1N1B4_1902	0.13	+1.2
2,175,402	+		Pf1N1B4_1902	0.13	-0.7
2,175,402	+		Pf1N1B4_1902	0.13	-1.1
2,175,402	+		Pf1N1B4_1902	0.13	-0.4
2,175,402	+		Pf1N1B4_1902	0.13	+0.5
2,175,402	+		Pf1N1B4_1902	0.13	+1.0
2,175,402	+		Pf1N1B4_1902	0.13	-0.1
2,175,402	+		Pf1N1B4_1902	0.13	+1.8
2,175,402	+		Pf1N1B4_1902	0.13	+0.6
2,175,402	+		Pf1N1B4_1902	0.13	-0.7
2,175,403	-		Pf1N1B4_1902	0.13	+1.5
2,175,403	-		Pf1N1B4_1902	0.13	+1.0
2,175,403	-		Pf1N1B4_1902	0.13	+0.3
2,175,403	-		Pf1N1B4_1902	0.13	+1.5
2,175,403	-		Pf1N1B4_1902	0.13	+0.9
2,175,403	-		Pf1N1B4_1902	0.13	+0.9
2,175,403	-		Pf1N1B4_1902	0.13	-0.3
2,175,403	-				+1.6
2,175,403	-		Pf1N1B4_1902	0.13	+2.5
2,175,403	-		Pf1N1B4_1902	0.13	-1.4
2,175,403	-		Pf1N1B4_1902	0.13	+0.9
2,175,403	-				-0.7
2,175,406	-		Pf1N1B4_1902	0.14	-0.7
2,175,469	+		Pf1N1B4_1902	0.20	+1.9
2,175,537	+		Pf1N1B4_1902	0.28	+1.6
2,175,537	+		Pf1N1B4_1902	0.28	+0.5
2,175,537	+		Pf1N1B4_1902	0.28	+1.2
2,175,538	-		Pf1N1B4_1902	0.28	-0.3
2,175,538	-		Pf1N1B4_1902	0.28	+1.6
2,175,538	-		Pf1N1B4_1902	0.28	+2.5
2,175,619	+		Pf1N1B4_1902	0.36	+2.1
2,175,619	+		Pf1N1B4_1902	0.36	+1.5
2,175,619	+		Pf1N1B4_1902	0.36	+1.5
2,175,619	+		Pf1N1B4_1902	0.36	+0.7
2,175,619	+		Pf1N1B4_1902	0.36	-1.9
2,175,619	+		Pf1N1B4_1902	0.36	-0.1
2,175,620	-		Pf1N1B4_1902	0.36	-1.7
2,175,701	+		Pf1N1B4_1902	0.45	-1.4
2,175,702	-		Pf1N1B4_1902	0.45	+0.4
2,175,901	-		Pf1N1B4_1902	0.66	+0.3
2,176,055	-		Pf1N1B4_1902	0.82	-0.3
2,176,055	-		Pf1N1B4_1902	0.82	+0.7