Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3443 and Dsui_3444 are separated by 282 nucleotides Dsui_3444 and Dsui_3445 are separated by 11 nucleotides
Dsui_3443: Dsui_3443 - RND family efflux transporter, MFP subunit, at 3,700,934 to 3,702,013
_3443
Dsui_3444: Dsui_3444 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 3,702,296 to 3,703,393
_3444
Dsui_3445: Dsui_3445 - hypothetical protein, at 3,703,405 to 3,705,051
_3445
Position (kb)
3702
3703
3704 Strain fitness (log2 ratio)
-2
-1
0
1 at 3701.373 kb on - strand at 3701.469 kb on - strand at 3701.524 kb on - strand, within Dsui_3443 at 3701.568 kb on + strand at 3701.574 kb on + strand, within Dsui_3443 at 3701.579 kb on + strand, within Dsui_3443 at 3701.587 kb on - strand at 3701.587 kb on - strand, within Dsui_3443 at 3701.625 kb on - strand, within Dsui_3443 at 3701.651 kb on + strand, within Dsui_3443 at 3701.852 kb on - strand at 3701.913 kb on + strand at 3701.932 kb on - strand at 3702.187 kb on - strand at 3702.279 kb on + strand at 3702.286 kb on + strand at 3702.347 kb on - strand at 3702.528 kb on + strand, within Dsui_3444 at 3702.579 kb on - strand, within Dsui_3444 at 3702.624 kb on + strand, within Dsui_3444 at 3702.654 kb on - strand, within Dsui_3444 at 3702.677 kb on - strand, within Dsui_3444 at 3702.775 kb on + strand, within Dsui_3444 at 3702.781 kb on - strand, within Dsui_3444 at 3702.783 kb on + strand, within Dsui_3444 at 3702.783 kb on - strand, within Dsui_3444 at 3702.961 kb on + strand, within Dsui_3444 at 3702.980 kb on + strand, within Dsui_3444 at 3703.059 kb on + strand, within Dsui_3444 at 3703.158 kb on + strand, within Dsui_3444 at 3703.375 kb on + strand at 3703.485 kb on + strand at 3703.490 kb on + strand at 3703.689 kb on + strand, within Dsui_3445 at 3703.812 kb on - strand, within Dsui_3445 at 3703.855 kb on - strand, within Dsui_3445 at 3703.879 kb on - strand at 3703.959 kb on - strand at 3703.976 kb on + strand, within Dsui_3445 at 3704.100 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.126 kb on - strand, within Dsui_3445 at 3704.256 kb on - strand, within Dsui_3445
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 3,701,373 - +0.5 3,701,469 - +0.5 3,701,524 - Dsui_3443 0.55 -1.1 3,701,568 + +0.5 3,701,574 + Dsui_3443 0.59 -0.5 3,701,579 + Dsui_3443 0.60 +0.5 3,701,587 - +0.5 3,701,587 - Dsui_3443 0.60 -1.5 3,701,625 - Dsui_3443 0.64 -1.1 3,701,651 + Dsui_3443 0.66 -1.5 3,701,852 - +0.5 3,701,913 + -0.5 3,701,932 - +0.5 3,702,187 - -0.5 3,702,279 + +0.1 3,702,286 + +0.4 3,702,347 - -1.1 3,702,528 + Dsui_3444 0.21 +0.5 3,702,579 - Dsui_3444 0.26 +0.5 3,702,624 + Dsui_3444 0.30 +0.4 3,702,654 - Dsui_3444 0.33 -0.5 3,702,677 - Dsui_3444 0.35 -1.8 3,702,775 + Dsui_3444 0.44 -0.1 3,702,781 - Dsui_3444 0.44 -1.8 3,702,783 + Dsui_3444 0.44 +0.5 3,702,783 - Dsui_3444 0.44 +0.5 3,702,961 + Dsui_3444 0.61 +0.5 3,702,980 + Dsui_3444 0.62 +0.5 3,703,059 + Dsui_3444 0.69 +0.2 3,703,158 + Dsui_3444 0.79 +0.8 3,703,375 + +0.6 3,703,485 + +0.4 3,703,490 + +0.2 3,703,689 + Dsui_3445 0.17 +0.3 3,703,812 - Dsui_3445 0.25 +0.5 3,703,855 - Dsui_3445 0.27 -0.5 3,703,879 - +0.5 3,703,959 - +0.5 3,703,976 + Dsui_3445 0.35 +0.5 3,704,100 + Dsui_3445 0.42 -1.4 3,704,118 + Dsui_3445 0.43 -1.9 3,704,118 + Dsui_3445 0.43 -1.0 3,704,126 - Dsui_3445 0.44 -0.5 3,704,256 - Dsui_3445 0.52 +0.5
Or see this region's nucleotide sequence