Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3426 and Dsui_3427 are separated by 138 nucleotides Dsui_3427 and Dsui_3428 are separated by 118 nucleotides Dsui_3428 and Dsui_3429 are separated by 219 nucleotides
Dsui_3426: Dsui_3426 - transcriptional regulator, at 3,677,023 to 3,677,925
_3426
Dsui_3427: Dsui_3427 - nicotinamidase-like amidase, at 3,678,064 to 3,678,588
_3427
Dsui_3428: Dsui_3428 - transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 3,678,707 to 3,679,666
_3428
Dsui_3429: Dsui_3429 - RND family efflux transporter, MFP subunit, at 3,679,886 to 3,681,043
_3429
Position (kb)
3678
3679
3680 Strain fitness (log2 ratio)
-2
-1
0
1 at 3677.772 kb on - strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.062 kb on + strand at 3678.149 kb on + strand, within Dsui_3427 at 3678.191 kb on + strand at 3678.196 kb on + strand at 3678.199 kb on - strand at 3678.251 kb on - strand at 3678.286 kb on - strand at 3678.302 kb on - strand at 3678.302 kb on - strand, within Dsui_3427 at 3678.460 kb on - strand at 3678.500 kb on + strand at 3678.557 kb on + strand at 3678.836 kb on - strand at 3678.876 kb on + strand, within Dsui_3428 at 3678.936 kb on - strand, within Dsui_3428 at 3678.963 kb on - strand at 3678.972 kb on + strand, within Dsui_3428 at 3679.111 kb on + strand at 3679.197 kb on + strand, within Dsui_3428 at 3679.295 kb on + strand at 3679.295 kb on + strand, within Dsui_3428 at 3679.303 kb on - strand at 3679.409 kb on + strand, within Dsui_3428 at 3679.423 kb on - strand at 3679.441 kb on - strand at 3679.608 kb on + strand at 3679.609 kb on + strand at 3679.661 kb on + strand at 3679.730 kb on + strand at 3679.787 kb on - strand at 3679.832 kb on - strand at 3679.857 kb on - strand at 3679.870 kb on + strand at 3679.878 kb on - strand at 3679.944 kb on - strand at 3679.956 kb on - strand at 3680.005 kb on + strand, within Dsui_3429 at 3680.005 kb on + strand, within Dsui_3429 at 3680.143 kb on + strand, within Dsui_3429 at 3680.347 kb on + strand, within Dsui_3429 at 3680.592 kb on - strand, within Dsui_3429 at 3680.603 kb on - strand, within Dsui_3429
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 3,677,772 - +0.5 3,678,062 + +0.5 3,678,062 + +0.5 3,678,062 + -1.1 3,678,062 + +0.5 3,678,062 + +0.5 3,678,062 + -1.1 3,678,062 + -0.5 3,678,062 + +0.5 3,678,062 + +0.5 3,678,149 + Dsui_3427 0.16 +0.5 3,678,191 + -0.5 3,678,196 + +0.5 3,678,199 - +0.5 3,678,251 - +0.5 3,678,286 - -1.1 3,678,302 - -1.5 3,678,302 - Dsui_3427 0.45 -0.5 3,678,460 - -1.1 3,678,500 + +0.5 3,678,557 + +0.5 3,678,836 - +0.5 3,678,876 + Dsui_3428 0.18 -1.8 3,678,936 - Dsui_3428 0.24 -1.1 3,678,963 - +0.5 3,678,972 + Dsui_3428 0.28 -0.4 3,679,111 + +0.5 3,679,197 + Dsui_3428 0.51 -0.8 3,679,295 + -1.1 3,679,295 + Dsui_3428 0.61 -0.2 3,679,303 - -1.1 3,679,409 + Dsui_3428 0.73 -2.0 3,679,423 - +0.5 3,679,441 - +0.5 3,679,608 + -0.3 3,679,609 + -1.1 3,679,661 + +0.5 3,679,730 + -0.5 3,679,787 - -0.5 3,679,832 - -1.1 3,679,857 - -1.5 3,679,870 + -1.4 3,679,878 - -1.5 3,679,944 - +0.5 3,679,956 - -0.5 3,680,005 + Dsui_3429 0.10 -0.1 3,680,005 + Dsui_3429 0.10 -0.8 3,680,143 + Dsui_3429 0.22 -0.3 3,680,347 + Dsui_3429 0.40 +0.1 3,680,592 - Dsui_3429 0.61 -0.5 3,680,603 - Dsui_3429 0.62 -1.5
Or see this region's nucleotide sequence