Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3381 and Dsui_3382 are separated by 382 nucleotides Dsui_3382 and Dsui_3383 are separated by 386 nucleotides
Dsui_3381: Dsui_3381 - hypothetical protein, at 3,623,299 to 3,623,874
_3381
Dsui_3382: Dsui_3382 - universal stress protein UspA-like protein, at 3,624,257 to 3,625,168
_3382
Dsui_3383: Dsui_3383 - cAMP-binding protein, at 3,625,555 to 3,626,256
_3383
Position (kb)
3624
3625
3626 Strain fitness (log2 ratio)
-2
-1
0
1 at 3623.282 kb on - strand at 3623.333 kb on - strand at 3623.371 kb on - strand, within Dsui_3381 at 3623.423 kb on - strand, within Dsui_3381 at 3623.460 kb on - strand, within Dsui_3381 at 3623.479 kb on + strand, within Dsui_3381 at 3623.590 kb on - strand, within Dsui_3381 at 3623.618 kb on - strand, within Dsui_3381 at 3623.635 kb on - strand, within Dsui_3381 at 3623.642 kb on + strand at 3623.706 kb on + strand at 3623.706 kb on + strand at 3623.714 kb on - strand, within Dsui_3381 at 3623.728 kb on + strand, within Dsui_3381 at 3623.741 kb on - strand, within Dsui_3381 at 3623.760 kb on - strand, within Dsui_3381 at 3623.887 kb on + strand at 3623.887 kb on + strand at 3623.887 kb on + strand at 3623.895 kb on - strand at 3624.018 kb on + strand at 3624.062 kb on + strand at 3624.062 kb on + strand at 3624.070 kb on - strand at 3624.070 kb on - strand at 3624.072 kb on - strand at 3624.270 kb on + strand at 3624.324 kb on - strand at 3624.365 kb on - strand, within Dsui_3382 at 3624.393 kb on - strand, within Dsui_3382 at 3624.518 kb on + strand, within Dsui_3382 at 3624.597 kb on + strand, within Dsui_3382 at 3624.603 kb on - strand, within Dsui_3382 at 3624.755 kb on + strand at 3624.762 kb on + strand at 3624.772 kb on + strand at 3624.787 kb on + strand, within Dsui_3382 at 3625.023 kb on - strand, within Dsui_3382 at 3625.094 kb on - strand at 3625.149 kb on + strand at 3625.149 kb on + strand at 3625.250 kb on - strand at 3625.318 kb on - strand at 3625.336 kb on - strand at 3625.545 kb on + strand at 3625.558 kb on - strand at 3625.593 kb on + strand at 3625.593 kb on + strand at 3625.601 kb on - strand at 3625.611 kb on - strand at 3625.616 kb on - strand at 3625.655 kb on + strand, within Dsui_3383 at 3625.821 kb on - strand, within Dsui_3383 at 3625.888 kb on - strand, within Dsui_3383 at 3625.918 kb on + strand, within Dsui_3383 at 3625.926 kb on - strand, within Dsui_3383 at 3625.990 kb on + strand, within Dsui_3383 at 3626.021 kb on + strand, within Dsui_3383 at 3626.028 kb on + strand, within Dsui_3383 at 3626.109 kb on + strand, within Dsui_3383
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 3,623,282 - -0.0 3,623,333 - -0.4 3,623,371 - Dsui_3381 0.12 -0.4 3,623,423 - Dsui_3381 0.22 -0.5 3,623,460 - Dsui_3381 0.28 -0.5 3,623,479 + Dsui_3381 0.31 -1.1 3,623,590 - Dsui_3381 0.51 -0.3 3,623,618 - Dsui_3381 0.55 -0.5 3,623,635 - Dsui_3381 0.58 -0.2 3,623,642 + +0.5 3,623,706 + -0.5 3,623,706 + -0.5 3,623,714 - Dsui_3381 0.72 -0.2 3,623,728 + Dsui_3381 0.74 -0.5 3,623,741 - Dsui_3381 0.77 -0.3 3,623,760 - Dsui_3381 0.80 -0.4 3,623,887 + -1.8 3,623,887 + +0.5 3,623,887 + -0.5 3,623,895 - -0.2 3,624,018 + +0.5 3,624,062 + -1.5 3,624,062 + -2.1 3,624,070 - +0.1 3,624,070 - -0.3 3,624,072 - -0.4 3,624,270 + +0.5 3,624,324 - -0.1 3,624,365 - Dsui_3382 0.12 -0.2 3,624,393 - Dsui_3382 0.15 -0.8 3,624,518 + Dsui_3382 0.29 -1.1 3,624,597 + Dsui_3382 0.37 -0.5 3,624,603 - Dsui_3382 0.38 -0.6 3,624,755 + +0.5 3,624,762 + +0.5 3,624,772 + -0.5 3,624,787 + Dsui_3382 0.58 -0.5 3,625,023 - Dsui_3382 0.84 -0.4 3,625,094 - -0.3 3,625,149 + -0.5 3,625,149 + -1.5 3,625,250 - +0.5 3,625,318 - +0.5 3,625,336 - -1.1 3,625,545 + -0.0 3,625,558 - +0.5 3,625,593 + +0.1 3,625,593 + +0.3 3,625,601 - -1.1 3,625,611 - -0.5 3,625,616 - -1.1 3,625,655 + Dsui_3383 0.14 +0.2 3,625,821 - Dsui_3383 0.38 -1.3 3,625,888 - Dsui_3383 0.47 -1.1 3,625,918 + Dsui_3383 0.52 +0.1 3,625,926 - Dsui_3383 0.53 -2.3 3,625,990 + Dsui_3383 0.62 -0.1 3,626,021 + Dsui_3383 0.66 +0.0 3,626,028 + Dsui_3383 0.67 +0.1 3,626,109 + Dsui_3383 0.79 -0.0
Or see this region's nucleotide sequence