Strain Fitness in Dechlorosoma suillum PS around Dsui_3249

Experiment: ALP with Thallium(I) acetate 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3248 and Dsui_3249 are separated by 18 nucleotidesDsui_3249 and Dsui_3250 are separated by 24 nucleotides Dsui_3248: Dsui_3248 - argininosuccinate synthase, at 3,488,583 to 3,489,812 _3248 Dsui_3249: Dsui_3249 - ornithine carbamoyltransferase, at 3,489,831 to 3,490,754 _3249 Dsui_3250: Dsui_3250 - acetylornithine/succinylornithine aminotransferase, at 3,490,779 to 3,491,951 _3250 Position (kb) 3489 3490 3491Strain fitness (log2 ratio) -1 0 1at 3490.759 kb on - strandat 3490.759 kb on - strandat 3490.766 kb on - strandat 3490.774 kb on - strandat 3490.784 kb on - strandat 3490.794 kb on - strandat 3490.818 kb on - strandat 3490.834 kb on - strandat 3490.834 kb on - strandat 3490.955 kb on - strand, within Dsui_3250at 3490.996 kb on - strand, within Dsui_3250at 3491.046 kb on - strand, within Dsui_3250at 3491.105 kb on - strand, within Dsui_3250at 3491.229 kb on - strand, within Dsui_3250at 3491.229 kb on - strand, within Dsui_3250at 3491.306 kb on - strand, within Dsui_3250at 3491.400 kb on - strand, within Dsui_3250at 3491.406 kb on - strand, within Dsui_3250

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml
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3,490,759 - +0.5
3,490,759 - -0.0
3,490,766 - -0.1
3,490,774 - -0.9
3,490,784 - -0.1
3,490,794 - -0.0
3,490,818 - +0.2
3,490,834 - +0.3
3,490,834 - -0.1
3,490,955 - Dsui_3250 0.15 -0.2
3,490,996 - Dsui_3250 0.18 -0.3
3,491,046 - Dsui_3250 0.23 +0.0
3,491,105 - Dsui_3250 0.28 +0.3
3,491,229 - Dsui_3250 0.38 +0.1
3,491,229 - Dsui_3250 0.38 +0.6
3,491,306 - Dsui_3250 0.45 +0.4
3,491,400 - Dsui_3250 0.53 +0.1
3,491,406 - Dsui_3250 0.53 +0.0

Or see this region's nucleotide sequence