Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3227 and Dsui_3228 are separated by 163 nucleotides Dsui_3228 and Dsui_3229 are separated by 72 nucleotides Dsui_3229 and Dsui_3230 are separated by 2 nucleotides
Dsui_3227: Dsui_3227 - 2-isopropylmalate synthase, at 3,465,263 to 3,466,945
_3227
Dsui_3228: Dsui_3228 - transcriptional regulator, at 3,467,109 to 3,467,576
_3228
Dsui_3229: Dsui_3229 - transglutaminase-like enzyme, predicted cysteine protease, at 3,467,649 to 3,468,590
_3229
Dsui_3230: Dsui_3230 - hypothetical protein, at 3,468,593 to 3,471,172
_3230
Position (kb)
3467
3468
3469 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3466.681 kb on + strand at 3466.717 kb on - strand, within Dsui_3227 at 3466.722 kb on - strand, within Dsui_3227 at 3466.837 kb on - strand at 3466.871 kb on - strand at 3466.886 kb on - strand at 3466.941 kb on - strand at 3467.154 kb on - strand at 3467.287 kb on + strand, within Dsui_3228 at 3467.338 kb on + strand, within Dsui_3228 at 3467.356 kb on + strand, within Dsui_3228 at 3467.420 kb on - strand, within Dsui_3228 at 3467.539 kb on + strand at 3467.556 kb on + strand at 3467.563 kb on - strand at 3467.617 kb on - strand at 3467.660 kb on - strand at 3467.667 kb on + strand at 3467.714 kb on + strand at 3467.722 kb on - strand at 3467.722 kb on - strand at 3467.722 kb on - strand at 3467.763 kb on - strand, within Dsui_3229 at 3467.805 kb on + strand at 3467.812 kb on - strand, within Dsui_3229 at 3467.820 kb on + strand at 3467.828 kb on - strand, within Dsui_3229 at 3467.950 kb on + strand at 3468.133 kb on - strand, within Dsui_3229 at 3468.149 kb on + strand at 3468.861 kb on - strand, within Dsui_3230 at 3469.179 kb on + strand at 3469.206 kb on - strand, within Dsui_3230 at 3469.233 kb on - strand, within Dsui_3230 at 3469.260 kb on - strand, within Dsui_3230 at 3469.337 kb on + strand at 3469.414 kb on - strand, within Dsui_3230 at 3469.552 kb on - strand at 3469.576 kb on + strand, within Dsui_3230
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 3,466,681 + +0.5 3,466,717 - Dsui_3227 0.86 -1.1 3,466,722 - Dsui_3227 0.87 -1.5 3,466,837 - +0.5 3,466,871 - +0.1 3,466,886 - +2.0 3,466,941 - -1.0 3,467,154 - -1.5 3,467,287 + Dsui_3228 0.38 -0.3 3,467,338 + Dsui_3228 0.49 -0.3 3,467,356 + Dsui_3228 0.53 -0.3 3,467,420 - Dsui_3228 0.66 -0.5 3,467,539 + -0.3 3,467,556 + +0.0 3,467,563 - -1.1 3,467,617 - +0.5 3,467,660 - -1.8 3,467,667 + -0.5 3,467,714 + +0.5 3,467,722 - +0.5 3,467,722 - +0.5 3,467,722 - -3.2 3,467,763 - Dsui_3229 0.12 -2.1 3,467,805 + +0.5 3,467,812 - Dsui_3229 0.17 -2.3 3,467,820 + -2.1 3,467,828 - Dsui_3229 0.19 -0.7 3,467,950 + +0.5 3,468,133 - Dsui_3229 0.51 -0.5 3,468,149 + -0.5 3,468,861 - Dsui_3230 0.10 -0.9 3,469,179 + -0.5 3,469,206 - Dsui_3230 0.24 -3.4 3,469,233 - Dsui_3230 0.25 -2.7 3,469,260 - Dsui_3230 0.26 -1.1 3,469,337 + +0.5 3,469,414 - Dsui_3230 0.32 -1.5 3,469,552 - +2.5 3,469,576 + Dsui_3230 0.38 -1.1
Or see this region's nucleotide sequence