Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2797 and Dsui_2798 are separated by 291 nucleotides Dsui_2798 and Dsui_2799 are separated by 108 nucleotides
Dsui_2797: Dsui_2797 - LysM repeat-containing protein, at 2,965,052 to 2,966,869
_2797
Dsui_2798: Dsui_2798 - arabinose efflux permease family protein, at 2,967,161 to 2,968,381
_2798
Dsui_2799: Dsui_2799 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 2,968,490 to 2,970,502
_2799
Position (kb)
2967
2968
2969 Strain fitness (log2 ratio)
-2
-1
0
1 at 2966.224 kb on + strand, within Dsui_2797 at 2966.254 kb on + strand, within Dsui_2797 at 2966.261 kb on - strand, within Dsui_2797 at 2966.261 kb on - strand, within Dsui_2797 at 2966.262 kb on - strand, within Dsui_2797 at 2966.546 kb on - strand at 2966.657 kb on - strand, within Dsui_2797 at 2966.657 kb on - strand, within Dsui_2797 at 2966.694 kb on - strand at 2966.715 kb on - strand at 2966.715 kb on - strand at 2966.738 kb on + strand at 2966.746 kb on - strand at 2966.813 kb on - strand at 2966.981 kb on - strand at 2967.011 kb on + strand at 2967.011 kb on + strand at 2967.019 kb on - strand at 2967.019 kb on - strand at 2967.063 kb on + strand at 2967.180 kb on - strand at 2967.245 kb on + strand at 2967.280 kb on + strand at 2967.288 kb on - strand, within Dsui_2798 at 2967.312 kb on - strand, within Dsui_2798 at 2967.315 kb on + strand, within Dsui_2798 at 2967.789 kb on + strand, within Dsui_2798 at 2967.789 kb on + strand, within Dsui_2798 at 2968.041 kb on + strand, within Dsui_2798 at 2968.091 kb on - strand, within Dsui_2798 at 2968.116 kb on + strand, within Dsui_2798 at 2968.130 kb on + strand, within Dsui_2798 at 2968.149 kb on - strand at 2968.173 kb on - strand, within Dsui_2798 at 2968.218 kb on + strand, within Dsui_2798 at 2968.233 kb on + strand, within Dsui_2798 at 2968.233 kb on + strand, within Dsui_2798 at 2968.241 kb on - strand at 2968.297 kb on + strand at 2968.316 kb on + strand at 2968.418 kb on - strand at 2968.540 kb on - strand at 2968.615 kb on - strand at 2968.633 kb on + strand at 2968.710 kb on - strand, within Dsui_2799 at 2968.754 kb on + strand at 2968.764 kb on + strand at 2968.820 kb on + strand at 2968.844 kb on - strand, within Dsui_2799 at 2968.909 kb on + strand at 2968.953 kb on + strand, within Dsui_2799 at 2969.116 kb on + strand at 2969.116 kb on + strand, within Dsui_2799 at 2969.340 kb on - strand, within Dsui_2799 at 2969.381 kb on - strand, within Dsui_2799
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,966,224 + Dsui_2797 0.64 +0.2 2,966,254 + Dsui_2797 0.66 +0.1 2,966,261 - Dsui_2797 0.67 -1.7 2,966,261 - Dsui_2797 0.67 +0.7 2,966,262 - Dsui_2797 0.67 +0.7 2,966,546 - -0.3 2,966,657 - Dsui_2797 0.88 -2.2 2,966,657 - Dsui_2797 0.88 +0.7 2,966,694 - +0.7 2,966,715 - -2.2 2,966,715 - -0.3 2,966,738 + +0.2 2,966,746 - -1.9 2,966,813 - -0.9 2,966,981 - -0.4 2,967,011 + -1.0 2,967,011 + +0.6 2,967,019 - -0.9 2,967,019 - +0.6 2,967,063 + -0.9 2,967,180 - +0.6 2,967,245 + +0.2 2,967,280 + -1.4 2,967,288 - Dsui_2798 0.10 -1.4 2,967,312 - Dsui_2798 0.12 -0.9 2,967,315 + Dsui_2798 0.13 -0.4 2,967,789 + Dsui_2798 0.51 -1.4 2,967,789 + Dsui_2798 0.51 +0.6 2,968,041 + Dsui_2798 0.72 +0.2 2,968,091 - Dsui_2798 0.76 -1.4 2,968,116 + Dsui_2798 0.78 -1.9 2,968,130 + Dsui_2798 0.79 -1.4 2,968,149 - +0.6 2,968,173 - Dsui_2798 0.83 -0.9 2,968,218 + Dsui_2798 0.87 -0.2 2,968,233 + Dsui_2798 0.88 -1.4 2,968,233 + Dsui_2798 0.88 -0.9 2,968,241 - -0.4 2,968,297 + -1.3 2,968,316 + -1.7 2,968,418 - -0.9 2,968,540 - -1.1 2,968,615 - -0.7 2,968,633 + +0.6 2,968,710 - Dsui_2799 0.11 -0.8 2,968,754 + +0.6 2,968,764 + +0.6 2,968,820 + -0.4 2,968,844 - Dsui_2799 0.18 -0.1 2,968,909 + -0.4 2,968,953 + Dsui_2799 0.23 -1.7 2,969,116 + +0.6 2,969,116 + Dsui_2799 0.31 -2.2 2,969,340 - Dsui_2799 0.42 -0.0 2,969,381 - Dsui_2799 0.44 -0.1
Or see this region's nucleotide sequence