Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2777 and Dsui_2778 are separated by 142 nucleotides Dsui_2778 and Dsui_2779 are separated by 183 nucleotides Dsui_2779 and Dsui_2780 are separated by 13 nucleotides Dsui_2780 and Dsui_2781 are separated by 14 nucleotides
Dsui_2777: Dsui_2777 - aminoacyl-histidine dipeptidase, at 2,939,292 to 2,940,860
_2777
Dsui_2778: Dsui_2778 - isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase, at 2,941,003 to 2,941,524
_2778
Dsui_2779: Dsui_2779 - PAS domain S-box, at 2,941,708 to 2,944,797
_2779
Dsui_2780: Dsui_2780 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 2,944,811 to 2,945,245
_2780
Dsui_2781: Dsui_2781 - PAS domain S-box, at 2,945,260 to 2,949,126
_2781
Position (kb)
2941
2942
2943
2944
2945 Strain fitness (log2 ratio)
-1
0
1
2 at 2940.957 kb on + strand at 2940.959 kb on + strand at 2941.192 kb on - strand at 2941.240 kb on - strand, within Dsui_2778 at 2941.316 kb on + strand, within Dsui_2778 at 2941.335 kb on + strand, within Dsui_2778 at 2941.352 kb on + strand, within Dsui_2778 at 2941.683 kb on - strand at 2941.684 kb on - strand at 2941.769 kb on + strand at 2941.793 kb on + strand at 2941.799 kb on + strand at 2941.886 kb on + strand at 2942.286 kb on - strand at 2942.336 kb on - strand, within Dsui_2779 at 2942.346 kb on - strand at 2942.418 kb on + strand at 2942.633 kb on - strand at 2942.848 kb on + strand at 2943.079 kb on - strand at 2943.259 kb on + strand at 2943.363 kb on + strand at 2943.755 kb on + strand, within Dsui_2779 at 2944.241 kb on - strand at 2944.509 kb on - strand at 2944.515 kb on + strand at 2944.756 kb on - strand at 2944.783 kb on + strand at 2944.791 kb on - strand at 2944.801 kb on - strand at 2945.170 kb on - strand at 2945.170 kb on - strand, within Dsui_2780 at 2945.212 kb on - strand at 2945.462 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,940,957 + +2.2 2,940,959 + -0.3 2,941,192 - -0.3 2,941,240 - Dsui_2778 0.45 -1.7 2,941,316 + Dsui_2778 0.60 -0.1 2,941,335 + Dsui_2778 0.64 -0.3 2,941,352 + Dsui_2778 0.67 -0.2 2,941,683 - -0.3 2,941,684 - -0.3 2,941,769 + -0.3 2,941,793 + +0.7 2,941,799 + +0.7 2,941,886 + -0.3 2,942,286 - +0.7 2,942,336 - Dsui_2779 0.20 +0.7 2,942,346 - +0.7 2,942,418 + +0.7 2,942,633 - +0.7 2,942,848 + +0.7 2,943,079 - -0.3 2,943,259 + +0.7 2,943,363 + +0.7 2,943,755 + Dsui_2779 0.66 -1.3 2,944,241 - +0.7 2,944,509 - +0.7 2,944,515 + -0.3 2,944,756 - -0.3 2,944,783 + +0.7 2,944,791 - -0.3 2,944,801 - +0.7 2,945,170 - +0.7 2,945,170 - Dsui_2780 0.83 -0.9 2,945,212 - -1.7 2,945,462 + -0.3
Or see this region's nucleotide sequence