Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2366 and Dsui_2367 are separated by 101 nucleotides Dsui_2367 and Dsui_2368 are separated by 54 nucleotides Dsui_2368 and Dsui_2369 are separated by 60 nucleotides Dsui_2369 and Dsui_2370 are separated by 16 nucleotides
Dsui_2366: Dsui_2366 - inositol monophosphatase/fructose-1,6-bisphosphatase family protein, at 2,517,717 to 2,518,520
_2366
Dsui_2367: Dsui_2367 - RNA methyltransferase, TrmH family, group 1, at 2,518,622 to 2,519,401
_2367
Dsui_2368: Dsui_2368 - serine O-acetyltransferase, at 2,519,456 to 2,520,211
_2368
Dsui_2369: Dsui_2369 - iron-sulfur cluster assembly transcription factor IscR, at 2,520,272 to 2,520,748
_2369
Dsui_2370: Dsui_2370 - cysteine desulfurase family protein, at 2,520,765 to 2,521,922
_2370
Position (kb)
2519
2520
2521 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2518.638 kb on + strand at 2518.648 kb on + strand at 2518.680 kb on - strand at 2518.725 kb on + strand, within Dsui_2367 at 2518.730 kb on + strand, within Dsui_2367 at 2518.740 kb on + strand, within Dsui_2367 at 2518.839 kb on + strand, within Dsui_2367 at 2518.884 kb on + strand, within Dsui_2367 at 2518.968 kb on + strand, within Dsui_2367 at 2518.979 kb on + strand, within Dsui_2367 at 2519.005 kb on + strand, within Dsui_2367 at 2519.070 kb on + strand, within Dsui_2367 at 2519.103 kb on + strand, within Dsui_2367 at 2519.184 kb on + strand, within Dsui_2367 at 2519.306 kb on + strand, within Dsui_2367 at 2519.370 kb on - strand at 2519.374 kb on + strand at 2519.450 kb on + strand at 2520.052 kb on + strand, within Dsui_2368 at 2520.052 kb on + strand, within Dsui_2368 at 2520.052 kb on + strand, within Dsui_2368 at 2520.123 kb on + strand, within Dsui_2368 at 2520.168 kb on - strand at 2520.220 kb on + strand at 2520.227 kb on + strand at 2520.388 kb on + strand, within Dsui_2369 at 2520.393 kb on + strand, within Dsui_2369 at 2520.629 kb on + strand, within Dsui_2369 at 2520.639 kb on + strand, within Dsui_2369 at 2520.673 kb on + strand, within Dsui_2369 at 2520.673 kb on + strand, within Dsui_2369 at 2520.721 kb on + strand at 2520.731 kb on + strand at 2520.731 kb on + strand at 2520.766 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,518,638 + -0.6 2,518,648 + -0.4 2,518,680 - +0.6 2,518,725 + Dsui_2367 0.13 -1.5 2,518,730 + Dsui_2367 0.14 +0.2 2,518,740 + Dsui_2367 0.15 -1.2 2,518,839 + Dsui_2367 0.28 -0.8 2,518,884 + Dsui_2367 0.34 -0.3 2,518,968 + Dsui_2367 0.44 +0.5 2,518,979 + Dsui_2367 0.46 -0.2 2,519,005 + Dsui_2367 0.49 -0.2 2,519,070 + Dsui_2367 0.57 -1.9 2,519,103 + Dsui_2367 0.62 +1.5 2,519,184 + Dsui_2367 0.72 -1.4 2,519,306 + Dsui_2367 0.88 -1.1 2,519,370 - +0.6 2,519,374 + -0.4 2,519,450 + -0.2 2,520,052 + Dsui_2368 0.79 -2.9 2,520,052 + Dsui_2368 0.79 -2.7 2,520,052 + Dsui_2368 0.79 -2.2 2,520,123 + Dsui_2368 0.88 -2.0 2,520,168 - -1.0 2,520,220 + -0.0 2,520,227 + -0.1 2,520,388 + Dsui_2369 0.24 -0.4 2,520,393 + Dsui_2369 0.25 +0.0 2,520,629 + Dsui_2369 0.75 -0.1 2,520,639 + Dsui_2369 0.77 -0.3 2,520,673 + Dsui_2369 0.84 +0.2 2,520,673 + Dsui_2369 0.84 -0.2 2,520,721 + +0.4 2,520,731 + -0.1 2,520,731 + -0.5 2,520,766 + -0.1
Or see this region's nucleotide sequence