Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2335 and Dsui_2336 overlap by 4 nucleotides Dsui_2336 and Dsui_2337 are separated by 383 nucleotides Dsui_2337 and Dsui_2339 are separated by 254 nucleotides
Dsui_2335: Dsui_2335 - Integral membrane protein CcmA involved in cell shape determination, at 2,488,704 to 2,489,153
_2335
Dsui_2336: Dsui_2336 - hypothetical protein, at 2,489,150 to 2,489,743
_2336
Dsui_2337: Dsui_2337 - putative Fe-S oxidoreductase, at 2,490,127 to 2,490,468
_2337
Dsui_2339: Dsui_2339 - putative domain HDIG-containing protein, at 2,490,723 to 2,491,634
_2339
Position (kb)
2490
2491 Strain fitness (log2 ratio)
-2
-1
0
1 at 2489.130 kb on + strand at 2489.230 kb on + strand, within Dsui_2336 at 2489.238 kb on - strand, within Dsui_2336 at 2489.238 kb on - strand, within Dsui_2336 at 2489.238 kb on - strand, within Dsui_2336 at 2489.280 kb on - strand, within Dsui_2336 at 2489.285 kb on - strand, within Dsui_2336 at 2489.411 kb on - strand, within Dsui_2336 at 2489.443 kb on - strand, within Dsui_2336 at 2489.469 kb on - strand, within Dsui_2336 at 2489.469 kb on - strand, within Dsui_2336 at 2489.469 kb on - strand, within Dsui_2336 at 2489.469 kb on - strand, within Dsui_2336 at 2489.554 kb on + strand, within Dsui_2336 at 2489.648 kb on + strand, within Dsui_2336 at 2489.711 kb on - strand at 2489.805 kb on - strand at 2489.859 kb on + strand at 2489.986 kb on + strand at 2490.040 kb on + strand at 2490.087 kb on + strand at 2490.523 kb on + strand at 2490.523 kb on + strand at 2490.613 kb on + strand at 2490.674 kb on + strand at 2490.692 kb on + strand at 2490.743 kb on - strand at 2490.812 kb on + strand at 2490.812 kb on + strand at 2490.812 kb on + strand at 2490.820 kb on - strand at 2490.820 kb on - strand at 2490.850 kb on + strand, within Dsui_2339 at 2490.990 kb on - strand, within Dsui_2339 at 2491.033 kb on + strand, within Dsui_2339 at 2491.041 kb on + strand at 2491.051 kb on + strand, within Dsui_2339 at 2491.087 kb on - strand at 2491.190 kb on - strand, within Dsui_2339 at 2491.240 kb on - strand at 2491.431 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,489,130 + -1.6 2,489,230 + Dsui_2336 0.13 -1.9 2,489,238 - Dsui_2336 0.15 -0.0 2,489,238 - Dsui_2336 0.15 -1.0 2,489,238 - Dsui_2336 0.15 +0.1 2,489,280 - Dsui_2336 0.22 +0.2 2,489,285 - Dsui_2336 0.23 -0.1 2,489,411 - Dsui_2336 0.44 -0.1 2,489,443 - Dsui_2336 0.49 +0.1 2,489,469 - Dsui_2336 0.54 -0.1 2,489,469 - Dsui_2336 0.54 +0.1 2,489,469 - Dsui_2336 0.54 +0.2 2,489,469 - Dsui_2336 0.54 +0.1 2,489,554 + Dsui_2336 0.68 -0.3 2,489,648 + Dsui_2336 0.84 +0.7 2,489,711 - -0.2 2,489,805 - -0.5 2,489,859 + -0.3 2,489,986 + -0.3 2,490,040 + -2.5 2,490,087 + -1.3 2,490,523 + -0.3 2,490,523 + +0.7 2,490,613 + -0.1 2,490,674 + -0.7 2,490,692 + -0.8 2,490,743 - -0.3 2,490,812 + -2.1 2,490,812 + +0.7 2,490,812 + -1.3 2,490,820 - +0.7 2,490,820 - +0.7 2,490,850 + Dsui_2339 0.14 -0.3 2,490,990 - Dsui_2339 0.29 -2.1 2,491,033 + Dsui_2339 0.34 +0.7 2,491,041 + +0.7 2,491,051 + Dsui_2339 0.36 +0.7 2,491,087 - +0.7 2,491,190 - Dsui_2339 0.51 -1.3 2,491,240 - +0.7 2,491,431 - -0.3
Or see this region's nucleotide sequence