Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2289 and Dsui_2290 overlap by 8 nucleotides Dsui_2290 and Dsui_2291 overlap by 4 nucleotides Dsui_2291 and Dsui_2292 are separated by 37 nucleotides Dsui_2292 and Dsui_2293 are separated by 156 nucleotides
Dsui_2289: Dsui_2289 - qaraquat-inducible protein B, at 2,443,404 to 2,444,975
_2289
Dsui_2290: Dsui_2290 - putative paraquat-inducible protein A, at 2,444,968 to 2,445,633
_2290
Dsui_2291: Dsui_2291 - putative paraquat-inducible protein A, at 2,445,630 to 2,446,265
_2291
Dsui_2292: Dsui_2292 - RRM domain-containing RNA-binding protein, at 2,446,303 to 2,446,542
_2292
Dsui_2293: Dsui_2293 - poly(3-hydroxyalkanoate) synthetase, at 2,446,699 to 2,448,483
_2293
Position (kb)
2445
2446
2447 Strain fitness (log2 ratio)
-2
-1
0
1 at 2444.836 kb on + strand at 2444.875 kb on - strand at 2444.914 kb on - strand at 2445.119 kb on - strand, within Dsui_2290 at 2445.148 kb on - strand, within Dsui_2290 at 2445.166 kb on - strand, within Dsui_2290 at 2445.189 kb on + strand at 2445.197 kb on - strand, within Dsui_2290 at 2445.221 kb on + strand at 2445.287 kb on - strand, within Dsui_2290 at 2445.323 kb on - strand, within Dsui_2290 at 2445.356 kb on - strand at 2445.829 kb on - strand, within Dsui_2291 at 2445.923 kb on - strand, within Dsui_2291 at 2445.975 kb on + strand at 2446.076 kb on + strand at 2446.077 kb on - strand at 2446.094 kb on + strand, within Dsui_2291 at 2446.158 kb on - strand, within Dsui_2291 at 2446.158 kb on - strand, within Dsui_2291 at 2446.158 kb on - strand at 2446.296 kb on - strand at 2446.518 kb on + strand at 2446.584 kb on - strand at 2446.739 kb on + strand at 2446.870 kb on + strand at 2446.879 kb on - strand at 2446.971 kb on - strand at 2447.024 kb on + strand, within Dsui_2293 at 2447.025 kb on - strand at 2447.182 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,444,836 + -0.3 2,444,875 - +0.7 2,444,914 - +0.7 2,445,119 - Dsui_2290 0.23 -1.6 2,445,148 - Dsui_2290 0.27 -0.9 2,445,166 - Dsui_2290 0.30 -2.6 2,445,189 + +0.7 2,445,197 - Dsui_2290 0.34 -0.3 2,445,221 + -0.3 2,445,287 - Dsui_2290 0.48 -0.9 2,445,323 - Dsui_2290 0.53 -0.9 2,445,356 - -0.3 2,445,829 - Dsui_2291 0.31 +0.7 2,445,923 - Dsui_2291 0.46 -0.3 2,445,975 + -0.3 2,446,076 + +0.7 2,446,077 - +0.7 2,446,094 + Dsui_2291 0.73 +0.7 2,446,158 - Dsui_2291 0.83 +0.7 2,446,158 - Dsui_2291 0.83 -0.3 2,446,158 - +0.7 2,446,296 - -1.6 2,446,518 + +0.7 2,446,584 - -0.9 2,446,739 + +0.7 2,446,870 + +0.7 2,446,879 - +0.7 2,446,971 - +0.7 2,447,024 + Dsui_2293 0.18 -0.9 2,447,025 - +0.7 2,447,182 + +0.7
Or see this region's nucleotide sequence