Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2272 and Dsui_2273 are separated by 55 nucleotides Dsui_2273 and Dsui_2274 are separated by 201 nucleotides Dsui_2274 and Dsui_2275 overlap by 17 nucleotides Dsui_2275 and Dsui_2276 are separated by 6 nucleotides
Dsui_2272: Dsui_2272 - hypothetical protein, at 2,422,947 to 2,424,431
_2272
Dsui_2273: Dsui_2273 - TonB-dependent siderophore receptor, at 2,424,487 to 2,426,691
_2273
Dsui_2274: Dsui_2274 - hypothetical protein, at 2,426,893 to 2,427,222
_2274
Dsui_2275: Dsui_2275 - putative transcriptional regulator, at 2,427,206 to 2,427,433
_2275
Dsui_2276: Dsui_2276 - Protein of unknown function (DUF2975), at 2,427,440 to 2,427,991
_2276
Position (kb)
2424
2425
2426
2427 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2423.561 kb on + strand at 2423.651 kb on + strand at 2423.762 kb on - strand at 2423.844 kb on - strand, within Dsui_2272 at 2423.867 kb on + strand at 2424.259 kb on - strand, within Dsui_2272 at 2424.279 kb on + strand at 2424.295 kb on + strand at 2424.327 kb on - strand at 2424.425 kb on - strand at 2424.518 kb on - strand at 2424.566 kb on + strand at 2424.574 kb on - strand at 2424.623 kb on + strand at 2424.631 kb on - strand at 2424.709 kb on - strand, within Dsui_2273 at 2424.812 kb on - strand, within Dsui_2273 at 2424.836 kb on - strand, within Dsui_2273 at 2425.032 kb on - strand, within Dsui_2273 at 2425.381 kb on - strand, within Dsui_2273 at 2425.474 kb on - strand, within Dsui_2273 at 2425.670 kb on - strand at 2425.711 kb on + strand at 2425.729 kb on - strand, within Dsui_2273 at 2425.867 kb on + strand at 2425.867 kb on + strand at 2425.875 kb on - strand, within Dsui_2273 at 2425.934 kb on - strand, within Dsui_2273 at 2426.245 kb on + strand at 2426.270 kb on + strand at 2426.342 kb on + strand at 2426.477 kb on - strand at 2426.498 kb on + strand at 2426.545 kb on - strand at 2426.604 kb on - strand at 2426.604 kb on - strand at 2426.679 kb on - strand at 2426.765 kb on - strand at 2426.880 kb on - strand at 2426.893 kb on - strand at 2426.939 kb on - strand, within Dsui_2274 at 2427.068 kb on - strand at 2427.247 kb on - strand, within Dsui_2275 at 2427.250 kb on + strand, within Dsui_2275 at 2427.309 kb on + strand, within Dsui_2275 at 2427.309 kb on + strand, within Dsui_2275 at 2427.309 kb on + strand at 2427.309 kb on + strand at 2427.309 kb on + strand, within Dsui_2275 at 2427.373 kb on + strand at 2427.446 kb on + strand at 2427.449 kb on - strand at 2427.469 kb on + strand at 2427.486 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,423,561 + -0.2 2,423,651 + -0.2 2,423,762 - -0.2 2,423,844 - Dsui_2272 0.60 -1.5 2,423,867 + +0.8 2,424,259 - Dsui_2272 0.88 -1.5 2,424,279 + +0.8 2,424,295 + +0.8 2,424,327 - -0.2 2,424,425 - -1.2 2,424,518 - +0.8 2,424,566 + -0.8 2,424,574 - +0.8 2,424,623 + +0.8 2,424,631 - -0.2 2,424,709 - Dsui_2273 0.10 -1.2 2,424,812 - Dsui_2273 0.15 +0.8 2,424,836 - Dsui_2273 0.16 -1.8 2,425,032 - Dsui_2273 0.25 +0.8 2,425,381 - Dsui_2273 0.41 -0.8 2,425,474 - Dsui_2273 0.45 -1.8 2,425,670 - +0.8 2,425,711 + +0.8 2,425,729 - Dsui_2273 0.56 +0.8 2,425,867 + -1.2 2,425,867 + -0.8 2,425,875 - Dsui_2273 0.63 -0.2 2,425,934 - Dsui_2273 0.66 +0.8 2,426,245 + +0.8 2,426,270 + -1.2 2,426,342 + -0.8 2,426,477 - -1.5 2,426,498 + -0.8 2,426,545 - -0.2 2,426,604 - +0.8 2,426,604 - -1.2 2,426,679 - -1.8 2,426,765 - -0.2 2,426,880 - -1.2 2,426,893 - +0.8 2,426,939 - Dsui_2274 0.14 -1.8 2,427,068 - +0.8 2,427,247 - Dsui_2275 0.18 -0.2 2,427,250 + Dsui_2275 0.19 -1.8 2,427,309 + Dsui_2275 0.45 +0.8 2,427,309 + Dsui_2275 0.45 -1.2 2,427,309 + +0.8 2,427,309 + +0.8 2,427,309 + Dsui_2275 0.45 +0.8 2,427,373 + +0.8 2,427,446 + -0.2 2,427,449 - +1.8 2,427,469 + -1.2 2,427,486 - -0.1
Or see this region's nucleotide sequence