Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2256 and Dsui_2257 are separated by 134 nucleotides Dsui_2257 and Dsui_2258 are separated by 135 nucleotides Dsui_2258 and Dsui_2259 are separated by 85 nucleotides
Dsui_2256: Dsui_2256 - flavodoxin reductase family protein, at 2,405,583 to 2,406,359
_2256
Dsui_2257: Dsui_2257 - transcriptional regulator, at 2,406,494 to 2,407,450
_2257
Dsui_2258: Dsui_2258 - cupin domain-containing protein, at 2,407,586 to 2,407,921
_2258
Dsui_2259: Dsui_2259 - hypothetical protein, at 2,408,007 to 2,408,198
_2259
Position (kb)
2406
2407
2408 Strain fitness (log2 ratio)
-1
0
1 at 2405.653 kb on - strand at 2405.714 kb on - strand, within Dsui_2256 at 2405.905 kb on - strand, within Dsui_2256 at 2405.905 kb on - strand, within Dsui_2256 at 2405.905 kb on - strand, within Dsui_2256 at 2405.975 kb on - strand, within Dsui_2256 at 2406.130 kb on - strand, within Dsui_2256 at 2406.130 kb on - strand, within Dsui_2256 at 2406.157 kb on - strand, within Dsui_2256 at 2406.230 kb on - strand, within Dsui_2256 at 2406.367 kb on - strand at 2406.503 kb on + strand at 2406.597 kb on + strand, within Dsui_2257 at 2406.706 kb on + strand, within Dsui_2257 at 2406.718 kb on - strand at 2406.742 kb on + strand, within Dsui_2257 at 2406.742 kb on + strand, within Dsui_2257 at 2406.760 kb on + strand, within Dsui_2257 at 2406.763 kb on - strand at 2406.785 kb on + strand, within Dsui_2257 at 2406.793 kb on - strand at 2406.829 kb on + strand, within Dsui_2257 at 2406.870 kb on + strand, within Dsui_2257 at 2406.875 kb on + strand, within Dsui_2257 at 2406.878 kb on + strand, within Dsui_2257 at 2406.878 kb on + strand, within Dsui_2257 at 2406.878 kb on - strand at 2406.878 kb on - strand at 2406.900 kb on + strand, within Dsui_2257 at 2406.926 kb on + strand, within Dsui_2257 at 2407.208 kb on + strand, within Dsui_2257 at 2407.284 kb on + strand, within Dsui_2257 at 2407.292 kb on - strand at 2407.356 kb on + strand at 2407.455 kb on + strand at 2407.513 kb on - strand at 2407.580 kb on - strand at 2407.614 kb on - strand at 2407.627 kb on + strand, within Dsui_2258 at 2407.982 kb on - strand at 2408.011 kb on - strand at 2408.059 kb on - strand, within Dsui_2259 at 2408.157 kb on - strand, within Dsui_2259 at 2408.191 kb on - strand at 2408.193 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,405,653 - +0.4 2,405,714 - Dsui_2256 0.17 +0.6 2,405,905 - Dsui_2256 0.41 +0.5 2,405,905 - Dsui_2256 0.41 +0.6 2,405,905 - Dsui_2256 0.41 +0.6 2,405,975 - Dsui_2256 0.50 +0.2 2,406,130 - Dsui_2256 0.70 +0.4 2,406,130 - Dsui_2256 0.70 +0.8 2,406,157 - Dsui_2256 0.74 +0.3 2,406,230 - Dsui_2256 0.83 +0.4 2,406,367 - +0.6 2,406,503 + -0.8 2,406,597 + Dsui_2257 0.11 +0.8 2,406,706 + Dsui_2257 0.22 +1.1 2,406,718 - -1.2 2,406,742 + Dsui_2257 0.26 +0.7 2,406,742 + Dsui_2257 0.26 +0.5 2,406,760 + Dsui_2257 0.28 +1.1 2,406,763 - +0.8 2,406,785 + Dsui_2257 0.30 +0.1 2,406,793 - +0.8 2,406,829 + Dsui_2257 0.35 +0.3 2,406,870 + Dsui_2257 0.39 +0.3 2,406,875 + Dsui_2257 0.40 +0.7 2,406,878 + Dsui_2257 0.40 +1.2 2,406,878 + Dsui_2257 0.40 +0.5 2,406,878 - -0.2 2,406,878 - -0.2 2,406,900 + Dsui_2257 0.42 -0.8 2,406,926 + Dsui_2257 0.45 -0.2 2,407,208 + Dsui_2257 0.75 +1.0 2,407,284 + Dsui_2257 0.83 +0.1 2,407,292 - -0.2 2,407,356 + +1.1 2,407,455 + +0.8 2,407,513 - +0.8 2,407,580 - -0.0 2,407,614 - -0.5 2,407,627 + Dsui_2258 0.12 -0.5 2,407,982 - -0.8 2,408,011 - -0.2 2,408,059 - Dsui_2259 0.27 +0.3 2,408,157 - Dsui_2259 0.78 -0.3 2,408,191 - +0.2 2,408,193 - +0.0
Or see this region's nucleotide sequence