Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2230 and Dsui_2231 overlap by 81 nucleotides Dsui_2231 and Dsui_2232 are separated by 196 nucleotides
Dsui_2230: Dsui_2230 - conserved hypothetical integral membrane protein, at 2,370,876 to 2,371,910
_2230
Dsui_2231: Dsui_2231 - arabinose efflux permease family protein, at 2,371,830 to 2,373,104
_2231
Dsui_2232: Dsui_2232 - hypothetical protein, at 2,373,301 to 2,374,512
_2232
Position (kb)
2371
2372
2373
2374 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2371.072 kb on + strand, within Dsui_2230 at 2371.085 kb on - strand at 2371.214 kb on - strand at 2371.247 kb on - strand at 2371.247 kb on - strand at 2371.468 kb on + strand at 2371.527 kb on - strand at 2371.672 kb on - strand at 2371.680 kb on + strand at 2371.759 kb on - strand, within Dsui_2230 at 2371.769 kb on - strand, within Dsui_2230 at 2371.786 kb on + strand, within Dsui_2230 at 2371.788 kb on - strand, within Dsui_2230 at 2371.887 kb on - strand at 2371.923 kb on - strand at 2371.923 kb on - strand at 2372.008 kb on - strand, within Dsui_2231 at 2372.023 kb on - strand at 2372.033 kb on - strand, within Dsui_2231 at 2372.100 kb on + strand, within Dsui_2231 at 2372.105 kb on + strand at 2372.119 kb on - strand, within Dsui_2231 at 2372.205 kb on + strand at 2372.248 kb on - strand at 2372.319 kb on + strand, within Dsui_2231 at 2372.330 kb on + strand at 2372.330 kb on + strand at 2372.338 kb on - strand, within Dsui_2231 at 2372.338 kb on - strand, within Dsui_2231 at 2372.493 kb on + strand, within Dsui_2231 at 2372.572 kb on + strand at 2372.635 kb on + strand, within Dsui_2231 at 2372.635 kb on - strand, within Dsui_2231 at 2372.688 kb on - strand, within Dsui_2231 at 2372.698 kb on - strand at 2372.698 kb on - strand, within Dsui_2231 at 2372.749 kb on + strand at 2372.750 kb on - strand, within Dsui_2231 at 2372.767 kb on - strand, within Dsui_2231 at 2372.797 kb on - strand, within Dsui_2231 at 2372.814 kb on + strand, within Dsui_2231 at 2372.817 kb on - strand, within Dsui_2231 at 2372.882 kb on + strand at 2372.907 kb on + strand, within Dsui_2231 at 2372.948 kb on + strand at 2372.956 kb on - strand, within Dsui_2231 at 2372.995 kb on + strand at 2373.000 kb on + strand at 2373.003 kb on - strand at 2373.008 kb on - strand at 2373.017 kb on - strand at 2373.052 kb on + strand at 2373.090 kb on + strand at 2373.098 kb on - strand at 2373.098 kb on - strand at 2373.098 kb on - strand at 2373.098 kb on - strand at 2373.098 kb on - strand at 2373.109 kb on - strand at 2373.109 kb on - strand at 2373.112 kb on + strand at 2373.120 kb on - strand at 2373.120 kb on - strand at 2373.147 kb on + strand at 2373.155 kb on - strand at 2373.169 kb on + strand at 2373.202 kb on + strand at 2373.254 kb on - strand at 2373.282 kb on + strand at 2373.282 kb on + strand at 2373.290 kb on - strand at 2373.290 kb on - strand at 2373.291 kb on - strand at 2373.292 kb on + strand at 2373.299 kb on + strand at 2373.299 kb on + strand at 2373.317 kb on + strand at 2373.324 kb on + strand at 2373.324 kb on + strand at 2373.324 kb on + strand at 2373.400 kb on + strand at 2373.424 kb on + strand, within Dsui_2232 at 2373.425 kb on + strand, within Dsui_2232 at 2373.425 kb on + strand at 2373.429 kb on + strand, within Dsui_2232 at 2373.429 kb on + strand at 2373.429 kb on + strand, within Dsui_2232 at 2373.429 kb on + strand, within Dsui_2232 at 2373.430 kb on + strand, within Dsui_2232 at 2373.435 kb on + strand at 2373.435 kb on + strand at 2373.435 kb on + strand at 2373.435 kb on + strand at 2373.447 kb on + strand at 2373.463 kb on + strand, within Dsui_2232 at 2373.499 kb on + strand at 2373.499 kb on + strand at 2373.499 kb on + strand at 2373.499 kb on + strand, within Dsui_2232 at 2373.507 kb on - strand at 2373.507 kb on - strand at 2373.528 kb on + strand at 2373.528 kb on + strand, within Dsui_2232 at 2373.539 kb on + strand at 2373.557 kb on + strand at 2373.557 kb on + strand at 2373.557 kb on + strand, within Dsui_2232 at 2373.557 kb on + strand at 2373.557 kb on + strand at 2373.567 kb on + strand at 2373.575 kb on + strand at 2373.578 kb on + strand at 2373.578 kb on + strand, within Dsui_2232 at 2373.578 kb on + strand, within Dsui_2232 at 2373.578 kb on + strand at 2373.580 kb on + strand at 2373.580 kb on + strand at 2373.580 kb on + strand at 2373.588 kb on + strand at 2373.605 kb on + strand at 2373.618 kb on + strand at 2373.636 kb on + strand at 2373.655 kb on + strand at 2373.674 kb on + strand at 2373.696 kb on + strand, within Dsui_2232 at 2373.745 kb on + strand at 2373.745 kb on + strand, within Dsui_2232 at 2373.755 kb on + strand, within Dsui_2232 at 2373.755 kb on + strand at 2373.760 kb on + strand at 2373.760 kb on + strand at 2373.760 kb on + strand at 2373.760 kb on + strand at 2373.760 kb on + strand at 2373.761 kb on + strand, within Dsui_2232 at 2373.761 kb on + strand at 2373.761 kb on + strand at 2373.761 kb on + strand at 2373.761 kb on + strand at 2373.761 kb on + strand, within Dsui_2232 at 2373.761 kb on + strand at 2373.761 kb on + strand, within Dsui_2232 at 2373.761 kb on + strand at 2373.761 kb on + strand, within Dsui_2232 at 2373.761 kb on + strand at 2373.761 kb on + strand at 2373.768 kb on + strand at 2373.783 kb on + strand at 2373.783 kb on + strand, within Dsui_2232 at 2373.783 kb on + strand, within Dsui_2232 at 2373.783 kb on + strand at 2373.788 kb on + strand, within Dsui_2232 at 2373.788 kb on + strand, within Dsui_2232 at 2373.795 kb on + strand at 2373.795 kb on + strand at 2373.795 kb on + strand, within Dsui_2232 at 2373.817 kb on + strand, within Dsui_2232 at 2373.817 kb on + strand at 2373.824 kb on + strand at 2373.824 kb on + strand, within Dsui_2232 at 2373.824 kb on + strand, within Dsui_2232 at 2373.824 kb on + strand, within Dsui_2232 at 2373.824 kb on + strand at 2373.824 kb on + strand at 2373.824 kb on + strand at 2373.826 kb on - strand at 2373.832 kb on - strand, within Dsui_2232 at 2373.838 kb on + strand at 2373.845 kb on + strand at 2373.845 kb on + strand at 2373.854 kb on + strand at 2373.868 kb on + strand at 2373.877 kb on - strand at 2373.887 kb on + strand at 2373.912 kb on + strand at 2373.919 kb on - strand at 2373.921 kb on + strand at 2373.923 kb on + strand at 2373.971 kb on + strand at 2373.979 kb on - strand at 2373.998 kb on - strand, within Dsui_2232 at 2374.007 kb on - strand at 2374.021 kb on + strand, within Dsui_2232 at 2374.031 kb on + strand at 2374.035 kb on + strand, within Dsui_2232 at 2374.077 kb on - strand at 2374.077 kb on - strand at 2374.097 kb on - strand at 2374.102 kb on - strand at 2374.104 kb on - strand, within Dsui_2232 at 2374.104 kb on - strand at 2374.104 kb on - strand, within Dsui_2232
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,371,072 + Dsui_2230 0.19 -1.3 2,371,085 - -0.2 2,371,214 - +0.8 2,371,247 - +0.8 2,371,247 - +0.8 2,371,468 + -1.2 2,371,527 - +0.8 2,371,672 - -0.2 2,371,680 + +0.8 2,371,759 - Dsui_2230 0.85 -1.2 2,371,769 - Dsui_2230 0.86 -0.7 2,371,786 + Dsui_2230 0.88 +0.8 2,371,788 - Dsui_2230 0.88 +1.4 2,371,887 - -1.3 2,371,923 - +1.4 2,371,923 - -1.6 2,372,008 - Dsui_2231 0.14 +0.8 2,372,023 - +2.4 2,372,033 - Dsui_2231 0.16 -0.7 2,372,100 + Dsui_2231 0.21 -1.5 2,372,105 + +0.8 2,372,119 - Dsui_2231 0.23 -1.7 2,372,205 + -0.7 2,372,248 - +0.8 2,372,319 + Dsui_2231 0.38 +0.8 2,372,330 + -0.2 2,372,330 + +0.8 2,372,338 - Dsui_2231 0.40 -1.2 2,372,338 - Dsui_2231 0.40 -1.2 2,372,493 + Dsui_2231 0.52 -0.2 2,372,572 + +0.8 2,372,635 + Dsui_2231 0.63 -0.7 2,372,635 - Dsui_2231 0.63 -1.2 2,372,688 - Dsui_2231 0.67 -1.5 2,372,698 - +0.8 2,372,698 - Dsui_2231 0.68 +0.8 2,372,749 + -0.2 2,372,750 - Dsui_2231 0.72 -1.5 2,372,767 - Dsui_2231 0.73 -0.7 2,372,797 - Dsui_2231 0.76 -1.2 2,372,814 + Dsui_2231 0.77 -0.2 2,372,817 - Dsui_2231 0.77 -2.6 2,372,882 + -1.2 2,372,907 + Dsui_2231 0.84 -1.2 2,372,948 + +0.8 2,372,956 - Dsui_2231 0.88 +0.8 2,372,995 + +0.8 2,373,000 + +0.8 2,373,003 - +0.8 2,373,008 - +0.8 2,373,017 - +0.8 2,373,052 + -0.7 2,373,090 + -0.7 2,373,098 - -0.2 2,373,098 - -0.7 2,373,098 - -0.2 2,373,098 - +0.8 2,373,098 - +0.8 2,373,109 - +0.8 2,373,109 - -0.2 2,373,112 + +0.8 2,373,120 - -2.0 2,373,120 - -1.7 2,373,147 + -1.5 2,373,155 - +0.8 2,373,169 + +0.8 2,373,202 + +0.8 2,373,254 - -0.2 2,373,282 + +0.8 2,373,282 + +0.8 2,373,290 - -0.7 2,373,290 - +0.8 2,373,291 - +0.8 2,373,292 + -0.2 2,373,299 + -0.2 2,373,299 + -2.2 2,373,317 + +0.8 2,373,324 + -0.2 2,373,324 + -0.7 2,373,324 + -0.2 2,373,400 + +0.8 2,373,424 + Dsui_2232 0.10 -0.2 2,373,425 + Dsui_2232 0.10 -0.2 2,373,425 + -0.7 2,373,429 + Dsui_2232 0.11 +0.8 2,373,429 + +0.8 2,373,429 + Dsui_2232 0.11 -0.2 2,373,429 + Dsui_2232 0.11 -0.7 2,373,430 + Dsui_2232 0.11 -0.7 2,373,435 + -0.7 2,373,435 + +0.8 2,373,435 + +0.8 2,373,435 + +0.8 2,373,447 + +0.8 2,373,463 + Dsui_2232 0.13 -0.7 2,373,499 + -0.2 2,373,499 + -0.7 2,373,499 + +0.8 2,373,499 + Dsui_2232 0.16 -0.2 2,373,507 - -0.2 2,373,507 - -0.7 2,373,528 + +0.8 2,373,528 + Dsui_2232 0.19 -0.7 2,373,539 + -0.2 2,373,557 + +0.8 2,373,557 + +0.8 2,373,557 + Dsui_2232 0.21 -0.2 2,373,557 + -0.2 2,373,557 + +0.8 2,373,567 + +0.8 2,373,575 + +0.8 2,373,578 + +0.8 2,373,578 + Dsui_2232 0.23 -0.7 2,373,578 + Dsui_2232 0.23 -0.7 2,373,578 + +0.8 2,373,580 + -0.7 2,373,580 + -0.2 2,373,580 + +0.8 2,373,588 + +0.8 2,373,605 + -0.2 2,373,618 + +0.8 2,373,636 + +0.8 2,373,655 + +0.8 2,373,674 + +0.8 2,373,696 + Dsui_2232 0.33 -0.7 2,373,745 + -0.2 2,373,745 + Dsui_2232 0.37 -1.5 2,373,755 + Dsui_2232 0.37 -0.7 2,373,755 + +0.8 2,373,760 + +0.8 2,373,760 + +0.8 2,373,760 + +0.8 2,373,760 + -0.2 2,373,760 + -0.2 2,373,761 + Dsui_2232 0.38 -1.7 2,373,761 + +0.8 2,373,761 + -0.7 2,373,761 + +0.8 2,373,761 + +0.8 2,373,761 + Dsui_2232 0.38 +0.8 2,373,761 + -0.7 2,373,761 + Dsui_2232 0.38 -0.7 2,373,761 + -0.2 2,373,761 + Dsui_2232 0.38 -0.7 2,373,761 + -0.2 2,373,761 + +0.8 2,373,768 + +0.8 2,373,783 + +0.8 2,373,783 + Dsui_2232 0.40 +0.8 2,373,783 + Dsui_2232 0.40 +0.8 2,373,783 + -0.2 2,373,788 + Dsui_2232 0.40 -0.7 2,373,788 + Dsui_2232 0.40 +0.8 2,373,795 + +0.8 2,373,795 + -0.2 2,373,795 + Dsui_2232 0.41 +0.8 2,373,817 + Dsui_2232 0.43 +0.8 2,373,817 + -0.7 2,373,824 + +0.8 2,373,824 + Dsui_2232 0.43 -2.0 2,373,824 + Dsui_2232 0.43 +0.8 2,373,824 + Dsui_2232 0.43 -1.2 2,373,824 + -0.2 2,373,824 + -0.2 2,373,824 + -1.2 2,373,826 - +0.8 2,373,832 - Dsui_2232 0.44 +0.8 2,373,838 + -0.2 2,373,845 + +0.8 2,373,845 + +0.8 2,373,854 + +0.8 2,373,868 + -0.2 2,373,877 - +0.8 2,373,887 + +0.8 2,373,912 + +0.8 2,373,919 - -0.2 2,373,921 + +0.8 2,373,923 + -0.7 2,373,971 + -0.2 2,373,979 - -0.7 2,373,998 - Dsui_2232 0.58 +0.0 2,374,007 - -0.7 2,374,021 + Dsui_2232 0.59 -0.7 2,374,031 + -0.7 2,374,035 + Dsui_2232 0.61 +0.8 2,374,077 - +0.8 2,374,077 - -1.2 2,374,097 - +0.8 2,374,102 - +0.8 2,374,104 - Dsui_2232 0.66 -0.7 2,374,104 - +0.8 2,374,104 - Dsui_2232 0.66 -1.2
Or see this region's nucleotide sequence