Strain Fitness in Dechlorosoma suillum PS around Dsui_2176

Experiment: ALP with Thallium(I) acetate 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2175 and Dsui_2176 are separated by 147 nucleotidesDsui_2176 and Dsui_2177 are separated by 89 nucleotidesDsui_2177 and Dsui_2178 are separated by 67 nucleotides Dsui_2175: Dsui_2175 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,310,714 to 2,312,354 _2175 Dsui_2176: Dsui_2176 - putative esterase of the alpha-beta hydrolase superfamily, at 2,312,502 to 2,313,542 _2176 Dsui_2177: Dsui_2177 - methyltransferase family protein, at 2,313,632 to 2,314,270 _2177 Dsui_2178: Dsui_2178 - hypothetical protein, at 2,314,338 to 2,315,144 _2178 Position (kb) 2312 2313 2314Strain fitness (log2 ratio) -1 0 1at 2312.352 kb on - strandat 2312.368 kb on - strandat 2312.457 kb on + strandat 2312.466 kb on - strandat 2312.585 kb on + strandat 2312.613 kb on - strandat 2312.701 kb on - strandat 2312.701 kb on - strand, within Dsui_2176at 2312.748 kb on + strand, within Dsui_2176at 2312.774 kb on + strand, within Dsui_2176at 2312.779 kb on + strand, within Dsui_2176at 2312.800 kb on + strand, within Dsui_2176at 2312.936 kb on + strandat 2313.083 kb on + strand, within Dsui_2176at 2313.213 kb on - strand, within Dsui_2176at 2313.217 kb on + strand, within Dsui_2176at 2313.229 kb on + strand, within Dsui_2176at 2313.351 kb on + strand, within Dsui_2176at 2313.444 kb on + strandat 2313.493 kb on + strandat 2313.578 kb on + strandat 2313.608 kb on + strandat 2313.663 kb on - strandat 2313.682 kb on - strandat 2313.685 kb on + strandat 2313.713 kb on - strandat 2313.786 kb on + strand, within Dsui_2177at 2313.904 kb on + strand, within Dsui_2177at 2313.951 kb on - strandat 2314.012 kb on + strand, within Dsui_2177at 2314.120 kb on - strand, within Dsui_2177at 2314.167 kb on + strandat 2314.243 kb on - strandat 2314.371 kb on + strandat 2314.429 kb on + strand, within Dsui_2178at 2314.523 kb on - strand, within Dsui_2178

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml
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2,312,352 - -0.0
2,312,368 - +0.1
2,312,457 + -0.1
2,312,466 - +0.3
2,312,585 + -0.1
2,312,613 - +0.9
2,312,701 - +0.9
2,312,701 - Dsui_2176 0.19 -0.1
2,312,748 + Dsui_2176 0.24 +0.9
2,312,774 + Dsui_2176 0.26 +0.9
2,312,779 + Dsui_2176 0.27 -0.1
2,312,800 + Dsui_2176 0.29 -0.7
2,312,936 + +0.9
2,313,083 + Dsui_2176 0.56 -0.7
2,313,213 - Dsui_2176 0.68 +0.9
2,313,217 + Dsui_2176 0.69 +0.9
2,313,229 + Dsui_2176 0.70 +0.9
2,313,351 + Dsui_2176 0.82 +0.9
2,313,444 + +0.9
2,313,493 + -0.1
2,313,578 + -0.7
2,313,608 + -1.1
2,313,663 - -0.7
2,313,682 - +0.9
2,313,685 + -0.4
2,313,713 - +0.9
2,313,786 + Dsui_2177 0.24 -1.6
2,313,904 + Dsui_2177 0.43 -0.7
2,313,951 - +0.9
2,314,012 + Dsui_2177 0.59 +0.2
2,314,120 - Dsui_2177 0.76 +0.9
2,314,167 + +0.9
2,314,243 - -0.7
2,314,371 + -0.7
2,314,429 + Dsui_2178 0.11 -1.7
2,314,523 - Dsui_2178 0.23 -0.7

Or see this region's nucleotide sequence