Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2027 and Dsui_2028 are separated by 100 nucleotides Dsui_2028 and Dsui_2029 are separated by 182 nucleotides Dsui_2029 and Dsui_2030 are separated by 79 nucleotides
Dsui_2027: Dsui_2027 - efflux transporter, outer membrane factor lipoprotein, NodT family, at 2,145,500 to 2,147,065
_2027
Dsui_2028: Dsui_2028 - putative endonuclease containing a URI domain, at 2,147,166 to 2,147,462
_2028
Dsui_2029: Dsui_2029 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,147,645 to 2,148,565
_2029
Dsui_2030: Dsui_2030 - branched-chain amino acid aminotransferase, group I, at 2,148,645 to 2,149,571
_2030
Position (kb)
2147
2148
2149 Strain fitness (log2 ratio)
-2
-1
0
1 at 2146.659 kb on + strand at 2146.750 kb on - strand at 2146.821 kb on + strand, within Dsui_2027 at 2146.879 kb on + strand at 2147.004 kb on - strand at 2147.027 kb on + strand at 2147.027 kb on + strand at 2147.323 kb on + strand at 2147.591 kb on - strand at 2147.603 kb on + strand at 2147.604 kb on - strand at 2147.616 kb on - strand at 2147.641 kb on + strand at 2147.658 kb on - strand at 2147.710 kb on - strand at 2147.967 kb on - strand, within Dsui_2029 at 2147.967 kb on - strand, within Dsui_2029 at 2148.089 kb on - strand, within Dsui_2029 at 2148.428 kb on + strand at 2148.535 kb on - strand at 2148.560 kb on + strand at 2148.560 kb on + strand at 2148.678 kb on + strand at 2148.690 kb on + strand at 2148.706 kb on + strand at 2148.746 kb on + strand at 2148.862 kb on - strand at 2148.908 kb on + strand, within Dsui_2030 at 2148.955 kb on - strand at 2149.058 kb on + strand at 2149.098 kb on - strand, within Dsui_2030 at 2149.098 kb on - strand at 2149.125 kb on - strand at 2149.189 kb on + strand at 2149.235 kb on + strand, within Dsui_2030 at 2149.290 kb on + strand at 2149.290 kb on + strand, within Dsui_2030 at 2149.312 kb on - strand, within Dsui_2030 at 2149.326 kb on - strand at 2149.363 kb on + strand at 2149.495 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,146,659 + -0.1 2,146,750 - +0.9 2,146,821 + Dsui_2027 0.84 -0.1 2,146,879 + +0.9 2,147,004 - -0.1 2,147,027 + +0.9 2,147,027 + +0.9 2,147,323 + +0.9 2,147,591 - +0.9 2,147,603 + +0.9 2,147,604 - +0.9 2,147,616 - +0.9 2,147,641 + -1.1 2,147,658 - -1.4 2,147,710 - -0.7 2,147,967 - Dsui_2029 0.35 +0.9 2,147,967 - Dsui_2029 0.35 -0.1 2,148,089 - Dsui_2029 0.48 -1.4 2,148,428 + -0.1 2,148,535 - -0.4 2,148,560 + -0.1 2,148,560 + -0.7 2,148,678 + -0.1 2,148,690 + -1.7 2,148,706 + -0.1 2,148,746 + +0.9 2,148,862 - +0.9 2,148,908 + Dsui_2030 0.28 -0.1 2,148,955 - +0.9 2,149,058 + -0.1 2,149,098 - Dsui_2030 0.49 -0.7 2,149,098 - +0.9 2,149,125 - +0.9 2,149,189 + +0.9 2,149,235 + Dsui_2030 0.64 -1.9 2,149,290 + +0.9 2,149,290 + Dsui_2030 0.70 -0.1 2,149,312 - Dsui_2030 0.72 -0.1 2,149,326 - -0.1 2,149,363 + +0.9 2,149,495 - -0.1
Or see this region's nucleotide sequence