Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1943 and Dsui_1944 are separated by 114 nucleotides Dsui_1944 and Dsui_1945 are separated by 84 nucleotides Dsui_1945 and Dsui_1946 overlap by 4 nucleotides
Dsui_1943: Dsui_1943 - ribosomal protein S1, at 2,055,434 to 2,057,140
_1943
Dsui_1944: Dsui_1944 - integration host factor, beta subunit, at 2,057,255 to 2,057,557
_1944
Dsui_1945: Dsui_1945 - uncharacterized integral membrane protein, at 2,057,642 to 2,057,968
_1945
Dsui_1946: Dsui_1946 - putative N-acetylglucosaminyl transferase, at 2,057,965 to 2,059,134
_1946
Position (kb)
2057
2058 Strain fitness (log2 ratio)
-1
0
1 at 2057.182 kb on - strand at 2057.205 kb on + strand at 2057.220 kb on - strand at 2057.262 kb on + strand at 2057.355 kb on + strand, within Dsui_1944 at 2057.360 kb on + strand, within Dsui_1944 at 2057.365 kb on + strand, within Dsui_1944 at 2057.373 kb on - strand at 2057.437 kb on + strand, within Dsui_1944 at 2057.443 kb on + strand, within Dsui_1944 at 2057.486 kb on + strand, within Dsui_1944 at 2057.507 kb on + strand, within Dsui_1944 at 2057.510 kb on - strand at 2057.519 kb on + strand, within Dsui_1944 at 2057.521 kb on + strand, within Dsui_1944 at 2057.525 kb on + strand, within Dsui_1944 at 2057.534 kb on - strand at 2057.565 kb on - strand at 2057.570 kb on + strand at 2057.575 kb on + strand at 2057.600 kb on + strand at 2057.600 kb on + strand at 2057.601 kb on + strand at 2057.608 kb on - strand at 2057.609 kb on - strand at 2057.646 kb on - strand at 2057.647 kb on - strand at 2057.653 kb on + strand at 2057.723 kb on + strand, within Dsui_1945 at 2057.774 kb on - strand, within Dsui_1945 at 2057.821 kb on - strand, within Dsui_1945 at 2057.829 kb on - strand, within Dsui_1945 at 2057.842 kb on + strand, within Dsui_1945 at 2058.075 kb on + strand at 2058.133 kb on + strand, within Dsui_1946 at 2058.271 kb on - strand, within Dsui_1946 at 2058.321 kb on + strand, within Dsui_1946 at 2058.377 kb on + strand, within Dsui_1946 at 2058.433 kb on + strand, within Dsui_1946 at 2058.470 kb on - strand, within Dsui_1946 at 2058.470 kb on - strand, within Dsui_1946 at 2058.501 kb on + strand, within Dsui_1946 at 2058.501 kb on + strand, within Dsui_1946 at 2058.509 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,057,182 - -0.6 2,057,205 + -0.3 2,057,220 - +1.0 2,057,262 + -1.2 2,057,355 + Dsui_1944 0.33 -0.5 2,057,360 + Dsui_1944 0.35 -0.8 2,057,365 + Dsui_1944 0.36 -0.5 2,057,373 - +1.0 2,057,437 + Dsui_1944 0.60 -0.3 2,057,443 + Dsui_1944 0.62 -0.6 2,057,486 + Dsui_1944 0.76 -0.2 2,057,507 + Dsui_1944 0.83 -0.4 2,057,510 - +1.0 2,057,519 + Dsui_1944 0.87 -0.9 2,057,521 + Dsui_1944 0.88 +0.5 2,057,525 + Dsui_1944 0.89 -0.5 2,057,534 - -0.6 2,057,565 - -0.6 2,057,570 + +0.4 2,057,575 + +0.7 2,057,600 + +0.6 2,057,600 + +0.5 2,057,601 + +0.3 2,057,608 - +0.0 2,057,609 - +1.0 2,057,646 - +0.0 2,057,647 - +0.0 2,057,653 + -0.4 2,057,723 + Dsui_1945 0.25 -0.3 2,057,774 - Dsui_1945 0.40 -0.6 2,057,821 - Dsui_1945 0.55 -0.6 2,057,829 - Dsui_1945 0.57 +1.0 2,057,842 + Dsui_1945 0.61 -0.4 2,058,075 + +0.5 2,058,133 + Dsui_1946 0.14 +0.1 2,058,271 - Dsui_1946 0.26 +0.0 2,058,321 + Dsui_1946 0.30 +0.0 2,058,377 + Dsui_1946 0.35 +0.1 2,058,433 + Dsui_1946 0.40 +0.1 2,058,470 - Dsui_1946 0.43 +0.0 2,058,470 - Dsui_1946 0.43 +1.0 2,058,501 + Dsui_1946 0.46 +0.4 2,058,501 + Dsui_1946 0.46 -0.0 2,058,509 - +1.0
Or see this region's nucleotide sequence