Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1905 and Dsui_1906 are separated by 261 nucleotides Dsui_1906 and Dsui_1907 are separated by 168 nucleotides
Dsui_1905: Dsui_1905 - PAS domain S-box, at 2,006,720 to 2,009,239
_1905
Dsui_1906: Dsui_1906 - uncharacterized membrane protein, possible Na+ channel or pump, at 2,009,501 to 2,010,217
_1906
Dsui_1907: Dsui_1907 - transcriptional regulator, at 2,010,386 to 2,011,264
_1907
Position (kb)
2009
2010
2011 Strain fitness (log2 ratio)
-2
-1
0
1 at 2008.533 kb on + strand at 2008.617 kb on - strand, within Dsui_1905 at 2008.639 kb on + strand, within Dsui_1905 at 2008.647 kb on - strand, within Dsui_1905 at 2008.752 kb on - strand, within Dsui_1905 at 2008.754 kb on + strand at 2008.769 kb on - strand, within Dsui_1905 at 2008.818 kb on + strand at 2008.886 kb on + strand at 2008.887 kb on + strand at 2008.893 kb on + strand at 2009.167 kb on + strand at 2009.258 kb on - strand at 2009.542 kb on - strand at 2009.549 kb on - strand at 2009.780 kb on - strand at 2009.788 kb on + strand at 2009.798 kb on + strand at 2009.822 kb on + strand at 2009.873 kb on - strand at 2009.965 kb on - strand at 2009.976 kb on + strand at 2009.977 kb on - strand, within Dsui_1906 at 2010.065 kb on - strand at 2010.076 kb on + strand, within Dsui_1906 at 2010.084 kb on - strand, within Dsui_1906 at 2010.182 kb on + strand at 2010.195 kb on + strand at 2010.364 kb on - strand at 2010.376 kb on + strand at 2010.394 kb on + strand at 2010.403 kb on - strand at 2010.413 kb on - strand at 2010.424 kb on - strand at 2010.497 kb on - strand at 2010.759 kb on + strand at 2010.780 kb on - strand, within Dsui_1907 at 2010.836 kb on - strand at 2010.836 kb on - strand at 2010.866 kb on + strand, within Dsui_1907 at 2010.874 kb on - strand, within Dsui_1907 at 2010.902 kb on + strand at 2010.904 kb on + strand, within Dsui_1907
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 2,008,533 + +0.8 2,008,617 - Dsui_1905 0.75 -2.0 2,008,639 + Dsui_1905 0.76 -0.2 2,008,647 - Dsui_1905 0.76 +0.8 2,008,752 - Dsui_1905 0.81 +0.8 2,008,754 + -0.2 2,008,769 - Dsui_1905 0.81 -2.5 2,008,818 + +0.8 2,008,886 + +0.8 2,008,887 + +0.8 2,008,893 + +0.8 2,009,167 + -0.8 2,009,258 - -0.2 2,009,542 - -0.2 2,009,549 - -0.2 2,009,780 - +0.8 2,009,788 + +0.8 2,009,798 + +0.8 2,009,822 + -0.2 2,009,873 - +0.8 2,009,965 - +0.8 2,009,976 + -0.2 2,009,977 - Dsui_1906 0.66 +0.8 2,010,065 - +0.8 2,010,076 + Dsui_1906 0.80 -1.2 2,010,084 - Dsui_1906 0.81 -1.8 2,010,182 + -0.2 2,010,195 + -0.2 2,010,364 - -0.2 2,010,376 + +0.8 2,010,394 + -0.2 2,010,403 - +0.8 2,010,413 - +0.8 2,010,424 - -1.8 2,010,497 - -0.2 2,010,759 + +0.8 2,010,780 - Dsui_1907 0.45 -0.8 2,010,836 - +0.8 2,010,836 - -0.2 2,010,866 + Dsui_1907 0.55 +0.8 2,010,874 - Dsui_1907 0.56 -1.2 2,010,902 + +0.8 2,010,904 + Dsui_1907 0.59 -2.0
Or see this region's nucleotide sequence