Strain Fitness in Dechlorosoma suillum PS around Dsui_1742

Experiment: ALP with Thallium(I) acetate 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1741 and Dsui_1742 are separated by 30 nucleotidesDsui_1742 and Dsui_1743 overlap by 1 nucleotidesDsui_1743 and Dsui_1744 are separated by 13 nucleotides Dsui_1741: Dsui_1741 - flagellar hook-associated protein FlgK, at 1,829,404 to 1,831,581 _1741 Dsui_1742: Dsui_1742 - flagellar hook-associated protein 3, at 1,831,612 to 1,832,580 _1742 Dsui_1743: Dsui_1743 - hypothetical protein, at 1,832,580 to 1,833,044 _1743 Dsui_1744: Dsui_1744 - flagellar biosynthetic protein FliR, at 1,833,058 to 1,833,843 _1744 Position (kb) 1831 1832 1833Strain fitness (log2 ratio) -3 -2 -1 0 1at 1830.612 kb on + strand, within Dsui_1741at 1830.620 kb on - strand, within Dsui_1741at 1830.634 kb on + strand, within Dsui_1741at 1830.696 kb on - strand, within Dsui_1741at 1830.709 kb on + strand, within Dsui_1741at 1830.709 kb on + strand, within Dsui_1741at 1830.710 kb on + strand, within Dsui_1741at 1830.716 kb on - strand, within Dsui_1741at 1831.074 kb on + strand, within Dsui_1741at 1831.093 kb on + strand, within Dsui_1741at 1831.104 kb on + strandat 1831.106 kb on + strand, within Dsui_1741at 1831.106 kb on + strand, within Dsui_1741at 1831.117 kb on - strand, within Dsui_1741at 1831.150 kb on + strand, within Dsui_1741at 1831.153 kb on - strand, within Dsui_1741at 1831.164 kb on + strand, within Dsui_1741at 1831.173 kb on - strandat 1831.181 kb on + strand, within Dsui_1741at 1831.349 kb on - strand, within Dsui_1741at 1831.349 kb on - strand, within Dsui_1741at 1831.362 kb on - strand, within Dsui_1741at 1831.480 kb on + strandat 1831.491 kb on + strandat 1831.491 kb on + strandat 1831.497 kb on - strandat 1831.501 kb on + strandat 1831.517 kb on - strandat 1831.540 kb on + strandat 1831.541 kb on + strandat 1831.541 kb on + strandat 1831.549 kb on - strandat 1831.549 kb on - strandat 1831.559 kb on - strandat 1831.561 kb on + strandat 1831.606 kb on + strandat 1831.606 kb on + strandat 1831.614 kb on - strandat 1831.632 kb on + strandat 1831.640 kb on - strandat 1831.675 kb on + strandat 1831.680 kb on + strandat 1831.688 kb on + strandat 1831.688 kb on - strandat 1831.696 kb on - strandat 1831.724 kb on + strand, within Dsui_1742at 1831.811 kb on - strand, within Dsui_1742at 1831.823 kb on - strand, within Dsui_1742at 1831.823 kb on - strand, within Dsui_1742at 1831.837 kb on + strand, within Dsui_1742at 1831.867 kb on - strand, within Dsui_1742at 1831.892 kb on - strand, within Dsui_1742at 1831.971 kb on + strand, within Dsui_1742at 1832.006 kb on + strand, within Dsui_1742at 1832.006 kb on + strand, within Dsui_1742at 1832.034 kb on - strand, within Dsui_1742at 1832.067 kb on - strand, within Dsui_1742at 1832.071 kb on + strand, within Dsui_1742at 1832.123 kb on - strand, within Dsui_1742at 1832.123 kb on - strand, within Dsui_1742at 1832.213 kb on + strand, within Dsui_1742at 1832.213 kb on + strand, within Dsui_1742at 1832.213 kb on + strand, within Dsui_1742at 1832.213 kb on + strand, within Dsui_1742at 1832.213 kb on + strand, within Dsui_1742at 1832.213 kb on + strand, within Dsui_1742at 1832.218 kb on + strand, within Dsui_1742at 1832.307 kb on - strand, within Dsui_1742at 1832.311 kb on + strand, within Dsui_1742at 1832.319 kb on - strand, within Dsui_1742at 1832.344 kb on + strand, within Dsui_1742at 1832.437 kb on + strand, within Dsui_1742at 1832.472 kb on + strand, within Dsui_1742at 1832.488 kb on - strandat 1832.517 kb on + strandat 1832.517 kb on + strandat 1832.517 kb on + strandat 1832.517 kb on + strandat 1832.525 kb on - strandat 1832.525 kb on - strandat 1832.525 kb on - strandat 1832.549 kb on + strandat 1832.555 kb on + strandat 1832.555 kb on + strandat 1832.563 kb on - strandat 1832.563 kb on - strandat 1832.599 kb on - strandat 1832.602 kb on - strandat 1832.664 kb on - strand, within Dsui_1743at 1832.675 kb on - strand, within Dsui_1743at 1832.679 kb on + strand, within Dsui_1743at 1832.682 kb on - strand, within Dsui_1743at 1832.687 kb on - strand, within Dsui_1743at 1832.813 kb on + strand, within Dsui_1743at 1832.821 kb on - strand, within Dsui_1743at 1832.875 kb on - strand, within Dsui_1743at 1832.916 kb on - strand, within Dsui_1743at 1833.007 kb on + strandat 1833.062 kb on + strandat 1833.083 kb on - strandat 1833.088 kb on - strandat 1833.134 kb on + strandat 1833.134 kb on + strandat 1833.134 kb on + strandat 1833.139 kb on + strand, within Dsui_1744at 1833.142 kb on - strand, within Dsui_1744at 1833.158 kb on - strand, within Dsui_1744at 1833.165 kb on + strand, within Dsui_1744at 1833.165 kb on + strand, within Dsui_1744at 1833.173 kb on - strand, within Dsui_1744at 1833.240 kb on + strand, within Dsui_1744at 1833.285 kb on + strand, within Dsui_1744at 1833.296 kb on + strand, within Dsui_1744at 1833.306 kb on + strand, within Dsui_1744at 1833.325 kb on - strand, within Dsui_1744at 1833.339 kb on + strandat 1833.347 kb on - strand, within Dsui_1744at 1833.383 kb on + strand, within Dsui_1744at 1833.391 kb on - strand, within Dsui_1744at 1833.444 kb on + strand, within Dsui_1744at 1833.452 kb on - strand, within Dsui_1744

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml
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1,830,612 + Dsui_1741 0.55 +0.5
1,830,620 - Dsui_1741 0.56 +0.2
1,830,634 + Dsui_1741 0.56 +0.5
1,830,696 - Dsui_1741 0.59 -0.1
1,830,709 + Dsui_1741 0.60 -3.3
1,830,709 + Dsui_1741 0.60 -2.0
1,830,710 + Dsui_1741 0.60 -2.5
1,830,716 - Dsui_1741 0.60 -1.8
1,831,074 + Dsui_1741 0.77 +0.5
1,831,093 + Dsui_1741 0.78 -1.5
1,831,104 + +0.5
1,831,106 + Dsui_1741 0.78 +0.5
1,831,106 + Dsui_1741 0.78 -0.5
1,831,117 - Dsui_1741 0.79 +0.5
1,831,150 + Dsui_1741 0.80 -0.5
1,831,153 - Dsui_1741 0.80 +0.5
1,831,164 + Dsui_1741 0.81 +0.5
1,831,173 - +0.5
1,831,181 + Dsui_1741 0.82 +0.5
1,831,349 - Dsui_1741 0.89 +0.5
1,831,349 - Dsui_1741 0.89 -0.5
1,831,362 - Dsui_1741 0.90 +0.5
1,831,480 + +0.5
1,831,491 + +0.5
1,831,491 + -0.5
1,831,497 - -1.5
1,831,501 + +0.5
1,831,517 - -0.2
1,831,540 + +0.5
1,831,541 + -1.5
1,831,541 + -1.0
1,831,549 - +0.5
1,831,549 - +0.5
1,831,559 - -1.5
1,831,561 + -1.5
1,831,606 + +0.5
1,831,606 + -1.0
1,831,614 - -0.5
1,831,632 + +0.5
1,831,640 - -2.8
1,831,675 + -2.3
1,831,680 + +0.5
1,831,688 + -0.2
1,831,688 - -0.5
1,831,696 - -2.3
1,831,724 + Dsui_1742 0.12 -2.5
1,831,811 - Dsui_1742 0.21 -0.5
1,831,823 - Dsui_1742 0.22 +0.5
1,831,823 - Dsui_1742 0.22 -1.5
1,831,837 + Dsui_1742 0.23 -1.0
1,831,867 - Dsui_1742 0.26 -1.5
1,831,892 - Dsui_1742 0.29 -1.0
1,831,971 + Dsui_1742 0.37 -1.0
1,832,006 + Dsui_1742 0.41 +0.5
1,832,006 + Dsui_1742 0.41 -1.6
1,832,034 - Dsui_1742 0.44 +0.5
1,832,067 - Dsui_1742 0.47 -1.8
1,832,071 + Dsui_1742 0.47 +0.5
1,832,123 - Dsui_1742 0.53 -1.8
1,832,123 - Dsui_1742 0.53 +0.5
1,832,213 + Dsui_1742 0.62 +0.5
1,832,213 + Dsui_1742 0.62 +0.5
1,832,213 + Dsui_1742 0.62 -0.5
1,832,213 + Dsui_1742 0.62 -0.5
1,832,213 + Dsui_1742 0.62 -1.5
1,832,213 + Dsui_1742 0.62 +0.5
1,832,218 + Dsui_1742 0.63 +0.5
1,832,307 - Dsui_1742 0.72 +0.5
1,832,311 + Dsui_1742 0.72 -1.5
1,832,319 - Dsui_1742 0.73 +0.5
1,832,344 + Dsui_1742 0.76 -1.0
1,832,437 + Dsui_1742 0.85 -1.0
1,832,472 + Dsui_1742 0.89 -0.4
1,832,488 - +0.6
1,832,517 + -0.2
1,832,517 + -1.0
1,832,517 + -0.4
1,832,517 + -0.4
1,832,525 - +0.6
1,832,525 - -2.3
1,832,525 - -1.8
1,832,549 + -0.6
1,832,555 + -1.3
1,832,555 + -0.9
1,832,563 - -1.4
1,832,563 - -0.8
1,832,599 - +0.6
1,832,602 - -0.4
1,832,664 - Dsui_1743 0.18 -1.4
1,832,675 - Dsui_1743 0.20 +0.6
1,832,679 + Dsui_1743 0.21 +0.1
1,832,682 - Dsui_1743 0.22 -0.4
1,832,687 - Dsui_1743 0.23 +0.6
1,832,813 + Dsui_1743 0.50 +0.6
1,832,821 - Dsui_1743 0.52 +0.6
1,832,875 - Dsui_1743 0.63 -0.2
1,832,916 - Dsui_1743 0.72 -1.2
1,833,007 + -1.4
1,833,062 + +0.6
1,833,083 - -0.0
1,833,088 - -1.1
1,833,134 + +0.5
1,833,134 + +0.5
1,833,134 + -1.8
1,833,139 + Dsui_1744 0.10 +0.5
1,833,142 - Dsui_1744 0.11 -0.7
1,833,158 - Dsui_1744 0.13 -0.4
1,833,165 + Dsui_1744 0.14 -0.5
1,833,165 + Dsui_1744 0.14 -1.8
1,833,173 - Dsui_1744 0.15 -0.2
1,833,240 + Dsui_1744 0.23 +0.5
1,833,285 + Dsui_1744 0.29 +0.5
1,833,296 + Dsui_1744 0.30 +0.5
1,833,306 + Dsui_1744 0.32 -0.5
1,833,325 - Dsui_1744 0.34 -0.2
1,833,339 + -0.5
1,833,347 - Dsui_1744 0.37 -0.0
1,833,383 + Dsui_1744 0.41 +0.5
1,833,391 - Dsui_1744 0.42 +0.4
1,833,444 + Dsui_1744 0.49 -1.0
1,833,452 - Dsui_1744 0.50 -0.1

Or see this region's nucleotide sequence