Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1545 and Dsui_1546 are separated by 36 nucleotides Dsui_1546 and Dsui_1547 are separated by 36 nucleotides Dsui_1547 and Dsui_1548 are separated by 67 nucleotides Dsui_1548 and Dsui_1549 are separated by 25 nucleotides
Dsui_1545: Dsui_1545 - phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent, at 1,605,822 to 1,606,478
_1545
Dsui_1546: Dsui_1546 - hypothetical protein, at 1,606,515 to 1,607,267
_1546
Dsui_1547: Dsui_1547 - putative membrane-associated protein, at 1,607,304 to 1,607,966
_1547
Dsui_1548: Dsui_1548 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 1,608,034 to 1,608,480
_1548
Dsui_1549: Dsui_1549 - PAS domain S-box, at 1,608,506 to 1,611,505
_1549
Position (kb)
1607
1608 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1606.574 kb on + strand at 1606.580 kb on + strand at 1606.792 kb on - strand, within Dsui_1546 at 1606.830 kb on + strand at 1606.847 kb on - strand, within Dsui_1546 at 1606.848 kb on - strand, within Dsui_1546 at 1606.921 kb on + strand, within Dsui_1546 at 1606.951 kb on + strand at 1606.996 kb on - strand, within Dsui_1546 at 1607.050 kb on - strand, within Dsui_1546 at 1607.050 kb on - strand, within Dsui_1546 at 1607.184 kb on - strand, within Dsui_1546 at 1607.225 kb on + strand at 1607.233 kb on - strand at 1607.319 kb on - strand at 1607.986 kb on - strand at 1608.008 kb on - strand at 1608.008 kb on - strand at 1608.008 kb on - strand at 1608.037 kb on + strand at 1608.074 kb on + strand at 1608.074 kb on + strand at 1608.074 kb on + strand at 1608.082 kb on - strand, within Dsui_1548 at 1608.084 kb on + strand, within Dsui_1548 at 1608.174 kb on + strand at 1608.186 kb on + strand at 1608.255 kb on + strand at 1608.263 kb on - strand at 1608.305 kb on + strand, within Dsui_1548 at 1608.342 kb on + strand, within Dsui_1548 at 1608.353 kb on + strand at 1608.513 kb on + strand at 1608.531 kb on - strand at 1608.577 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 1,606,574 + -1.5 1,606,580 + -0.5 1,606,792 - Dsui_1546 0.37 -1.6 1,606,830 + -0.5 1,606,847 - Dsui_1546 0.44 -1.1 1,606,848 - Dsui_1546 0.44 -0.5 1,606,921 + Dsui_1546 0.54 +0.5 1,606,951 + -0.5 1,606,996 - Dsui_1546 0.64 +0.3 1,607,050 - Dsui_1546 0.71 +0.5 1,607,050 - Dsui_1546 0.71 -1.4 1,607,184 - Dsui_1546 0.89 -2.8 1,607,225 + -0.5 1,607,233 - -0.3 1,607,319 - -1.6 1,607,986 - -0.8 1,608,008 - -2.3 1,608,008 - -1.5 1,608,008 - +0.2 1,608,037 + -1.1 1,608,074 + -1.8 1,608,074 + -0.5 1,608,074 + -0.5 1,608,082 - Dsui_1548 0.11 +0.5 1,608,084 + Dsui_1548 0.11 -0.5 1,608,174 + -1.5 1,608,186 + +0.5 1,608,255 + -1.5 1,608,263 - +0.5 1,608,305 + Dsui_1548 0.61 -1.1 1,608,342 + Dsui_1548 0.69 +0.5 1,608,353 + -1.1 1,608,513 + -0.5 1,608,531 - -2.1 1,608,577 - +0.5
Or see this region's nucleotide sequence