Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1254 and Dsui_1255 are separated by 53 nucleotides Dsui_1255 and Dsui_1256 are separated by 4 nucleotides Dsui_1256 and Dsui_1257 are separated by 45 nucleotides
Dsui_1254: Dsui_1254 - TonB-dependent copper receptor, at 1,315,724 to 1,317,742
_1254
Dsui_1255: Dsui_1255 - mannose-6-phosphate isomerase, at 1,317,796 to 1,318,281
_1255
Dsui_1256: Dsui_1256 - hypothetical protein, at 1,318,286 to 1,318,540
_1256
Dsui_1257: Dsui_1257 - DNA-directed DNA polymerase III PolC, at 1,318,586 to 1,322,041
_1257
Position (kb)
1317
1318
1319 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1316.800 kb on + strand, within Dsui_1254 at 1316.808 kb on - strand, within Dsui_1254 at 1316.808 kb on - strand, within Dsui_1254 at 1316.912 kb on - strand, within Dsui_1254 at 1317.037 kb on - strand at 1317.078 kb on - strand, within Dsui_1254 at 1317.084 kb on - strand, within Dsui_1254 at 1317.192 kb on - strand, within Dsui_1254 at 1317.206 kb on + strand, within Dsui_1254 at 1317.214 kb on - strand, within Dsui_1254 at 1317.214 kb on - strand, within Dsui_1254 at 1317.309 kb on - strand, within Dsui_1254 at 1317.328 kb on - strand, within Dsui_1254 at 1317.390 kb on + strand, within Dsui_1254 at 1317.420 kb on - strand, within Dsui_1254 at 1317.427 kb on + strand, within Dsui_1254 at 1317.589 kb on - strand at 1317.589 kb on - strand at 1317.594 kb on - strand at 1317.599 kb on - strand at 1317.619 kb on + strand at 1317.627 kb on - strand at 1317.627 kb on - strand at 1317.645 kb on - strand at 1317.648 kb on + strand at 1317.763 kb on - strand at 1317.773 kb on - strand at 1317.823 kb on + strand at 1317.856 kb on - strand, within Dsui_1255 at 1317.916 kb on + strand, within Dsui_1255 at 1317.928 kb on + strand, within Dsui_1255 at 1317.936 kb on - strand, within Dsui_1255 at 1318.004 kb on - strand, within Dsui_1255 at 1318.025 kb on - strand, within Dsui_1255 at 1318.057 kb on + strand at 1318.083 kb on + strand, within Dsui_1255 at 1318.083 kb on - strand, within Dsui_1255 at 1318.125 kb on - strand, within Dsui_1255 at 1318.140 kb on - strand, within Dsui_1255 at 1318.151 kb on - strand, within Dsui_1255 at 1318.285 kb on - strand at 1318.315 kb on - strand, within Dsui_1256 at 1318.359 kb on - strand, within Dsui_1256 at 1318.488 kb on - strand, within Dsui_1256 at 1318.502 kb on - strand, within Dsui_1256 at 1318.549 kb on + strand at 1318.554 kb on + strand at 1318.557 kb on - strand at 1318.557 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 1,316,800 + Dsui_1254 0.53 +0.3 1,316,808 - Dsui_1254 0.54 -1.7 1,316,808 - Dsui_1254 0.54 +0.3 1,316,912 - Dsui_1254 0.59 -2.8 1,317,037 - +0.3 1,317,078 - Dsui_1254 0.67 -1.7 1,317,084 - Dsui_1254 0.67 -0.2 1,317,192 - Dsui_1254 0.73 -1.7 1,317,206 + Dsui_1254 0.73 -1.3 1,317,214 - Dsui_1254 0.74 +0.3 1,317,214 - Dsui_1254 0.74 +0.8 1,317,309 - Dsui_1254 0.79 -1.2 1,317,328 - Dsui_1254 0.79 +0.3 1,317,390 + Dsui_1254 0.83 -0.8 1,317,420 - Dsui_1254 0.84 -1.2 1,317,427 + Dsui_1254 0.84 -0.7 1,317,589 - +0.3 1,317,589 - +0.3 1,317,594 - +1.9 1,317,599 - -0.7 1,317,619 + -0.1 1,317,627 - +0.3 1,317,627 - +0.3 1,317,645 - -2.5 1,317,648 + -1.2 1,317,763 - -0.8 1,317,773 - -0.8 1,317,823 + -0.7 1,317,856 - Dsui_1255 0.12 -1.4 1,317,916 + Dsui_1255 0.25 -1.0 1,317,928 + Dsui_1255 0.27 -2.2 1,317,936 - Dsui_1255 0.29 -0.8 1,318,004 - Dsui_1255 0.43 -0.8 1,318,025 - Dsui_1255 0.47 -0.5 1,318,057 + +0.3 1,318,083 + Dsui_1255 0.59 -2.7 1,318,083 - Dsui_1255 0.59 -0.7 1,318,125 - Dsui_1255 0.68 -0.4 1,318,140 - Dsui_1255 0.71 -0.5 1,318,151 - Dsui_1255 0.73 -0.6 1,318,285 - -0.7 1,318,315 - Dsui_1256 0.11 -0.3 1,318,359 - Dsui_1256 0.29 -0.2 1,318,488 - Dsui_1256 0.79 -0.3 1,318,502 - Dsui_1256 0.85 +0.1 1,318,549 + -1.7 1,318,554 + -1.2 1,318,557 - +0.2 1,318,557 - -2.6
Or see this region's nucleotide sequence