Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1191 and Dsui_1192 are separated by 132 nucleotides Dsui_1192 and Dsui_1193 are separated by 175 nucleotides Dsui_1193 and Dsui_1194 are separated by 48 nucleotides
Dsui_1191: Dsui_1191 - type IV pilus secretin PilQ/competence protein, at 1,243,206 to 1,245,380
_1191
Dsui_1192: Dsui_1192 - tRNA-Met, at 1,245,513 to 1,245,589
_1192
Dsui_1193: Dsui_1193 - hypothetical protein, at 1,245,765 to 1,246,151
_1193
Dsui_1194: Dsui_1194 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 1,246,200 to 1,247,540
_1194
Position (kb)
1245
1246
1247 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1244.776 kb on - strand, within Dsui_1191 at 1244.785 kb on + strand, within Dsui_1191 at 1244.815 kb on - strand, within Dsui_1191 at 1244.822 kb on + strand, within Dsui_1191 at 1244.822 kb on + strand, within Dsui_1191 at 1244.822 kb on + strand, within Dsui_1191 at 1244.849 kb on - strand, within Dsui_1191 at 1244.875 kb on + strand, within Dsui_1191 at 1244.875 kb on + strand, within Dsui_1191 at 1244.875 kb on + strand, within Dsui_1191 at 1244.883 kb on - strand, within Dsui_1191 at 1244.927 kb on - strand, within Dsui_1191 at 1244.949 kb on - strand, within Dsui_1191 at 1244.957 kb on + strand, within Dsui_1191 at 1244.957 kb on + strand, within Dsui_1191 at 1244.959 kb on - strand, within Dsui_1191 at 1244.965 kb on - strand, within Dsui_1191 at 1244.965 kb on - strand, within Dsui_1191 at 1244.970 kb on - strand, within Dsui_1191 at 1245.067 kb on - strand, within Dsui_1191 at 1245.099 kb on - strand, within Dsui_1191 at 1245.154 kb on + strand, within Dsui_1191 at 1245.164 kb on + strand at 1245.164 kb on + strand at 1245.172 kb on - strand at 1245.172 kb on - strand at 1245.172 kb on - strand at 1245.247 kb on + strand at 1245.255 kb on - strand at 1245.255 kb on - strand at 1245.272 kb on + strand at 1245.272 kb on + strand at 1245.272 kb on + strand at 1245.280 kb on - strand at 1245.280 kb on - strand at 1245.299 kb on + strand at 1245.309 kb on + strand at 1245.309 kb on + strand at 1245.309 kb on + strand at 1245.317 kb on - strand at 1245.317 kb on - strand at 1245.317 kb on - strand at 1245.319 kb on + strand at 1245.319 kb on + strand at 1245.319 kb on + strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.382 kb on - strand at 1245.393 kb on + strand at 1245.408 kb on - strand at 1245.413 kb on + strand at 1245.421 kb on - strand at 1245.449 kb on + strand at 1245.449 kb on + strand at 1245.452 kb on - strand at 1245.452 kb on - strand at 1245.457 kb on - strand at 1245.662 kb on - strand at 1245.704 kb on - strand at 1245.720 kb on - strand at 1245.731 kb on + strand at 1245.859 kb on - strand, within Dsui_1193 at 1245.866 kb on - strand, within Dsui_1193 at 1245.915 kb on - strand, within Dsui_1193 at 1245.967 kb on + strand, within Dsui_1193 at 1245.976 kb on + strand, within Dsui_1193 at 1245.981 kb on - strand, within Dsui_1193 at 1246.000 kb on - strand, within Dsui_1193 at 1246.058 kb on + strand, within Dsui_1193 at 1246.120 kb on + strand at 1246.132 kb on + strand at 1246.145 kb on - strand at 1246.149 kb on - strand at 1246.156 kb on + strand at 1246.164 kb on - strand at 1246.164 kb on - strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.190 kb on - strand at 1246.190 kb on - strand at 1246.192 kb on + strand at 1246.198 kb on - strand at 1246.217 kb on + strand at 1246.219 kb on - strand at 1246.252 kb on + strand at 1246.270 kb on - strand at 1246.280 kb on - strand at 1246.283 kb on + strand at 1246.283 kb on + strand at 1246.283 kb on + strand at 1246.291 kb on - strand at 1246.317 kb on - strand at 1246.348 kb on - strand, within Dsui_1194 at 1246.367 kb on + strand, within Dsui_1194 at 1246.367 kb on + strand, within Dsui_1194 at 1246.616 kb on + strand, within Dsui_1194 at 1246.624 kb on - strand at 1246.628 kb on + strand, within Dsui_1194 at 1246.636 kb on - strand, within Dsui_1194 at 1246.782 kb on - strand, within Dsui_1194 at 1246.899 kb on + strand, within Dsui_1194 at 1246.909 kb on + strand, within Dsui_1194 at 1246.917 kb on - strand, within Dsui_1194 at 1246.917 kb on - strand, within Dsui_1194 at 1246.951 kb on + strand, within Dsui_1194 at 1246.980 kb on - strand, within Dsui_1194 at 1246.986 kb on - strand, within Dsui_1194 at 1246.992 kb on + strand, within Dsui_1194 at 1246.997 kb on + strand, within Dsui_1194 at 1247.002 kb on + strand, within Dsui_1194 at 1247.072 kb on + strand, within Dsui_1194 at 1247.104 kb on + strand, within Dsui_1194
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 1,244,776 - Dsui_1191 0.72 -2.6 1,244,785 + Dsui_1191 0.73 -0.6 1,244,815 - Dsui_1191 0.74 -0.7 1,244,822 + Dsui_1191 0.74 -0.2 1,244,822 + Dsui_1191 0.74 -0.2 1,244,822 + Dsui_1191 0.74 -0.0 1,244,849 - Dsui_1191 0.76 +0.4 1,244,875 + Dsui_1191 0.77 -0.3 1,244,875 + Dsui_1191 0.77 -0.3 1,244,875 + Dsui_1191 0.77 +0.2 1,244,883 - Dsui_1191 0.77 -1.2 1,244,927 - Dsui_1191 0.79 -0.3 1,244,949 - Dsui_1191 0.80 -1.6 1,244,957 + Dsui_1191 0.81 +0.0 1,244,957 + Dsui_1191 0.81 -0.1 1,244,959 - Dsui_1191 0.81 -1.1 1,244,965 - Dsui_1191 0.81 -1.9 1,244,965 - Dsui_1191 0.81 -3.3 1,244,970 - Dsui_1191 0.81 +0.4 1,245,067 - Dsui_1191 0.86 -0.4 1,245,099 - Dsui_1191 0.87 -0.8 1,245,154 + Dsui_1191 0.90 -0.2 1,245,164 + -0.1 1,245,164 + -0.3 1,245,172 - -0.2 1,245,172 - +0.4 1,245,172 - +0.2 1,245,247 + -0.3 1,245,255 - -0.4 1,245,255 - +0.0 1,245,272 + -0.1 1,245,272 + -0.4 1,245,272 + -0.3 1,245,280 - -0.5 1,245,280 - +0.0 1,245,299 + -0.1 1,245,309 + -0.3 1,245,309 + -0.6 1,245,309 + +0.1 1,245,317 - -0.7 1,245,317 - -0.2 1,245,317 - +0.0 1,245,319 + -0.5 1,245,319 + -0.7 1,245,319 + -0.2 1,245,327 - -0.7 1,245,327 - -1.0 1,245,327 - -0.5 1,245,327 - -0.4 1,245,327 - +0.4 1,245,382 - -1.3 1,245,393 + -0.3 1,245,408 - +0.4 1,245,413 + +0.0 1,245,421 - -0.8 1,245,449 + -0.5 1,245,449 + -0.2 1,245,452 - -0.2 1,245,452 - +0.1 1,245,457 - -0.3 1,245,662 - +0.4 1,245,704 - -0.6 1,245,720 - +0.4 1,245,731 + -0.2 1,245,859 - Dsui_1193 0.24 -2.2 1,245,866 - Dsui_1193 0.26 -0.6 1,245,915 - Dsui_1193 0.39 +0.4 1,245,967 + Dsui_1193 0.52 -0.3 1,245,976 + Dsui_1193 0.55 -0.4 1,245,981 - Dsui_1193 0.56 -2.2 1,246,000 - Dsui_1193 0.61 -0.6 1,246,058 + Dsui_1193 0.76 -0.2 1,246,120 + -0.3 1,246,132 + -0.1 1,246,145 - -2.4 1,246,149 - +0.4 1,246,156 + +0.0 1,246,164 - -1.6 1,246,164 - -0.6 1,246,182 + -0.0 1,246,182 + -0.3 1,246,182 + +0.2 1,246,182 + -0.1 1,246,182 + -0.3 1,246,190 - -1.2 1,246,190 - -1.2 1,246,192 + +0.1 1,246,198 - -1.6 1,246,217 + +0.0 1,246,219 - -1.2 1,246,252 + -0.2 1,246,270 - -2.2 1,246,280 - -1.2 1,246,283 + -0.3 1,246,283 + -0.3 1,246,283 + +0.4 1,246,291 - -1.6 1,246,317 - -1.2 1,246,348 - Dsui_1194 0.11 -0.6 1,246,367 + Dsui_1194 0.12 +0.0 1,246,367 + Dsui_1194 0.12 -0.1 1,246,616 + Dsui_1194 0.31 -0.5 1,246,624 - +0.4 1,246,628 + Dsui_1194 0.32 -0.2 1,246,636 - Dsui_1194 0.33 +0.4 1,246,782 - Dsui_1194 0.43 +0.4 1,246,899 + Dsui_1194 0.52 -0.2 1,246,909 + Dsui_1194 0.53 -0.3 1,246,917 - Dsui_1194 0.53 +0.4 1,246,917 - Dsui_1194 0.53 +0.4 1,246,951 + Dsui_1194 0.56 -1.7 1,246,980 - Dsui_1194 0.58 -1.2 1,246,986 - Dsui_1194 0.59 +0.4 1,246,992 + Dsui_1194 0.59 +0.2 1,246,997 + Dsui_1194 0.59 +0.1 1,247,002 + Dsui_1194 0.60 -0.7 1,247,072 + Dsui_1194 0.65 -0.2 1,247,104 + Dsui_1194 0.67 -0.1
Or see this region's nucleotide sequence