Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1151 and Dsui_1152 are separated by 79 nucleotides Dsui_1152 and Dsui_1153 overlap by 4 nucleotides
Dsui_1151: Dsui_1151 - transcriptional regulator, at 1,205,546 to 1,206,466
_1151
Dsui_1152: Dsui_1152 - Ni,Fe-hydrogenase I large subunit, at 1,206,546 to 1,208,006
_1152
Dsui_1153: Dsui_1153 - Ni,Fe-hydrogenase I small subunit, at 1,208,003 to 1,208,998
_1153
Position (kb)
1206
1207
1208
1209 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1205.582 kb on - strand at 1205.660 kb on + strand, within Dsui_1151 at 1205.680 kb on + strand, within Dsui_1151 at 1205.688 kb on + strand, within Dsui_1151 at 1205.707 kb on - strand, within Dsui_1151 at 1205.770 kb on + strand, within Dsui_1151 at 1205.770 kb on + strand, within Dsui_1151 at 1205.778 kb on - strand, within Dsui_1151 at 1205.824 kb on + strand, within Dsui_1151 at 1205.844 kb on + strand, within Dsui_1151 at 1205.873 kb on - strand at 1205.886 kb on - strand, within Dsui_1151 at 1205.931 kb on - strand, within Dsui_1151 at 1205.992 kb on - strand, within Dsui_1151 at 1205.992 kb on - strand, within Dsui_1151 at 1206.002 kb on - strand, within Dsui_1151 at 1206.046 kb on + strand, within Dsui_1151 at 1206.054 kb on + strand, within Dsui_1151 at 1206.060 kb on + strand, within Dsui_1151 at 1206.107 kb on - strand, within Dsui_1151 at 1206.184 kb on - strand, within Dsui_1151 at 1206.209 kb on + strand, within Dsui_1151 at 1206.250 kb on - strand, within Dsui_1151 at 1206.277 kb on + strand, within Dsui_1151 at 1206.357 kb on + strand, within Dsui_1151 at 1206.379 kb on + strand at 1206.379 kb on + strand at 1206.379 kb on + strand at 1206.387 kb on - strand at 1206.469 kb on - strand at 1206.564 kb on - strand at 1206.602 kb on + strand at 1206.667 kb on - strand at 1206.865 kb on - strand, within Dsui_1152 at 1206.974 kb on - strand, within Dsui_1152 at 1207.031 kb on - strand, within Dsui_1152 at 1207.064 kb on - strand, within Dsui_1152 at 1207.089 kb on + strand, within Dsui_1152 at 1207.107 kb on + strand at 1207.156 kb on - strand, within Dsui_1152 at 1207.352 kb on + strand, within Dsui_1152 at 1207.447 kb on + strand, within Dsui_1152 at 1207.455 kb on - strand, within Dsui_1152 at 1207.455 kb on - strand, within Dsui_1152 at 1207.497 kb on - strand, within Dsui_1152 at 1207.575 kb on + strand at 1207.724 kb on + strand, within Dsui_1152 at 1207.728 kb on - strand at 1207.781 kb on - strand, within Dsui_1152 at 1207.904 kb on - strand at 1207.906 kb on + strand at 1207.943 kb on + strand at 1207.943 kb on + strand at 1207.943 kb on + strand at 1207.951 kb on - strand at 1207.957 kb on - strand at 1207.966 kb on + strand at 1207.985 kb on - strand at 1208.014 kb on - strand at 1208.046 kb on - strand at 1208.122 kb on - strand, within Dsui_1153 at 1208.133 kb on + strand, within Dsui_1153 at 1208.165 kb on - strand, within Dsui_1153 at 1208.216 kb on + strand, within Dsui_1153 at 1208.269 kb on - strand, within Dsui_1153 at 1208.335 kb on + strand, within Dsui_1153 at 1208.415 kb on - strand, within Dsui_1153 at 1208.562 kb on + strand, within Dsui_1153 at 1208.719 kb on - strand, within Dsui_1153
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 1,205,582 - -2.4 1,205,660 + Dsui_1151 0.12 -1.3 1,205,680 + Dsui_1151 0.15 -0.5 1,205,688 + Dsui_1151 0.15 -0.2 1,205,707 - Dsui_1151 0.17 -0.6 1,205,770 + Dsui_1151 0.24 -0.8 1,205,770 + Dsui_1151 0.24 -0.6 1,205,778 - Dsui_1151 0.25 -0.6 1,205,824 + Dsui_1151 0.30 -0.6 1,205,844 + Dsui_1151 0.32 -0.7 1,205,873 - -1.2 1,205,886 - Dsui_1151 0.37 -1.6 1,205,931 - Dsui_1151 0.42 +0.4 1,205,992 - Dsui_1151 0.48 -2.7 1,205,992 - Dsui_1151 0.48 -1.2 1,206,002 - Dsui_1151 0.50 +0.4 1,206,046 + Dsui_1151 0.54 -0.8 1,206,054 + Dsui_1151 0.55 -0.9 1,206,060 + Dsui_1151 0.56 -0.7 1,206,107 - Dsui_1151 0.61 -2.7 1,206,184 - Dsui_1151 0.69 +0.4 1,206,209 + Dsui_1151 0.72 -0.7 1,206,250 - Dsui_1151 0.76 -0.6 1,206,277 + Dsui_1151 0.79 -0.8 1,206,357 + Dsui_1151 0.88 -0.5 1,206,379 + -0.8 1,206,379 + -0.6 1,206,379 + -0.8 1,206,387 - -2.2 1,206,469 - -1.9 1,206,564 - +0.4 1,206,602 + -2.2 1,206,667 - +0.7 1,206,865 - Dsui_1152 0.22 -1.2 1,206,974 - Dsui_1152 0.29 +0.0 1,207,031 - Dsui_1152 0.33 -0.7 1,207,064 - Dsui_1152 0.35 +0.0 1,207,089 + Dsui_1152 0.37 -0.6 1,207,107 + +0.4 1,207,156 - Dsui_1152 0.42 +1.4 1,207,352 + Dsui_1152 0.55 -1.2 1,207,447 + Dsui_1152 0.62 -2.8 1,207,455 - Dsui_1152 0.62 -0.4 1,207,455 - Dsui_1152 0.62 -0.8 1,207,497 - Dsui_1152 0.65 -0.4 1,207,575 + -0.6 1,207,724 + Dsui_1152 0.81 +0.4 1,207,728 - -0.6 1,207,781 - Dsui_1152 0.85 -1.5 1,207,904 - +1.2 1,207,906 + +0.4 1,207,943 + +0.4 1,207,943 + -0.6 1,207,943 + +0.4 1,207,951 - -0.4 1,207,957 - -1.8 1,207,966 + -2.4 1,207,985 - -1.0 1,208,014 - +0.4 1,208,046 - -1.0 1,208,122 - Dsui_1153 0.12 -1.4 1,208,133 + Dsui_1153 0.13 -1.2 1,208,165 - Dsui_1153 0.16 -0.6 1,208,216 + Dsui_1153 0.21 -0.6 1,208,269 - Dsui_1153 0.27 -0.4 1,208,335 + Dsui_1153 0.33 -0.6 1,208,415 - Dsui_1153 0.41 +1.8 1,208,562 + Dsui_1153 0.56 -0.6 1,208,719 - Dsui_1153 0.72 -0.9
Or see this region's nucleotide sequence