Strain Fitness in Dechlorosoma suillum PS around Dsui_1101

Experiment: ALP with Thallium(I) acetate 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1099 and Dsui_1100 are separated by 9 nucleotidesDsui_1100 and Dsui_1101 are separated by 3 nucleotidesDsui_1101 and Dsui_1102 are separated by 81 nucleotides Dsui_1099: Dsui_1099 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 1,142,307 to 1,143,665 _1099 Dsui_1100: Dsui_1100 - hypothetical protein, at 1,143,675 to 1,143,983 _1100 Dsui_1101: Dsui_1101 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing, at 1,143,987 to 1,145,813 _1101 Dsui_1102: Dsui_1102 - hypothetical protein, at 1,145,895 to 1,146,902 _1102 Position (kb) 1143 1144 1145 1146Strain fitness (log2 ratio) -2 -1 0 1at 1145.934 kb on - strandat 1145.996 kb on - strand, within Dsui_1102at 1146.123 kb on - strand, within Dsui_1102at 1146.170 kb on + strand, within Dsui_1102at 1146.175 kb on + strand, within Dsui_1102at 1146.175 kb on + strand, within Dsui_1102at 1146.183 kb on - strand, within Dsui_1102at 1146.185 kb on + strand, within Dsui_1102at 1146.206 kb on + strand, within Dsui_1102at 1146.214 kb on - strand, within Dsui_1102at 1146.214 kb on - strand, within Dsui_1102at 1146.214 kb on - strand, within Dsui_1102at 1146.214 kb on - strand, within Dsui_1102at 1146.329 kb on + strand, within Dsui_1102at 1146.382 kb on - strand, within Dsui_1102at 1146.681 kb on + strand, within Dsui_1102at 1146.683 kb on + strand, within Dsui_1102at 1146.691 kb on - strand, within Dsui_1102at 1146.725 kb on - strand, within Dsui_1102at 1146.728 kb on + strand, within Dsui_1102at 1146.736 kb on - strand, within Dsui_1102at 1146.736 kb on - strand, within Dsui_1102at 1146.753 kb on - strand, within Dsui_1102

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml
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1,145,934 - -0.2
1,145,996 - Dsui_1102 0.10 +0.1
1,146,123 - Dsui_1102 0.23 -2.7
1,146,170 + Dsui_1102 0.27 +0.1
1,146,175 + Dsui_1102 0.28 +0.3
1,146,175 + Dsui_1102 0.28 +0.1
1,146,183 - Dsui_1102 0.29 -1.1
1,146,185 + Dsui_1102 0.29 +0.1
1,146,206 + Dsui_1102 0.31 +0.5
1,146,214 - Dsui_1102 0.32 -0.8
1,146,214 - Dsui_1102 0.32 -1.1
1,146,214 - Dsui_1102 0.32 +1.5
1,146,214 - Dsui_1102 0.32 +0.5
1,146,329 + Dsui_1102 0.43 -0.1
1,146,382 - Dsui_1102 0.48 -0.8
1,146,681 + Dsui_1102 0.78 -0.4
1,146,683 + Dsui_1102 0.78 -0.2
1,146,691 - Dsui_1102 0.79 -1.5
1,146,725 - Dsui_1102 0.82 +0.5
1,146,728 + Dsui_1102 0.83 -0.7
1,146,736 - Dsui_1102 0.83 -0.5
1,146,736 - Dsui_1102 0.83 -1.8
1,146,753 - Dsui_1102 0.85 +0.5

Or see this region's nucleotide sequence