Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0969 and Dsui_0970 are separated by 139 nucleotides Dsui_0970 and Dsui_0971 are separated by 73 nucleotides
Dsui_0969: Dsui_0969 - putative AP superfamily protein, at 994,177 to 995,337
_0969
Dsui_0970: Dsui_0970 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 995,477 to 996,766
_0970
Dsui_0971: Dsui_0971 - poly(R)-hydroxyalkanoic acid synthase, class I, at 996,840 to 998,669
_0971
Position (kb) 995
996
997 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 994.575 kb on + strand, within Dsui_0969 at 994.617 kb on + strand, within Dsui_0969 at 994.674 kb on - strand, within Dsui_0969 at 994.723 kb on + strand, within Dsui_0969 at 994.731 kb on - strand, within Dsui_0969 at 994.793 kb on + strand, within Dsui_0969 at 994.831 kb on + strand, within Dsui_0969 at 994.839 kb on - strand, within Dsui_0969 at 994.875 kb on - strand, within Dsui_0969 at 994.979 kb on + strand, within Dsui_0969 at 994.999 kb on - strand, within Dsui_0969 at 995.144 kb on + strand, within Dsui_0969 at 995.152 kb on - strand at 995.245 kb on + strand at 995.263 kb on - strand at 995.299 kb on - strand at 995.475 kb on + strand at 995.613 kb on + strand, within Dsui_0970 at 995.645 kb on + strand, within Dsui_0970 at 995.689 kb on + strand, within Dsui_0970 at 996.113 kb on + strand, within Dsui_0970 at 996.135 kb on + strand, within Dsui_0970 at 996.144 kb on - strand, within Dsui_0970 at 996.230 kb on - strand at 996.247 kb on - strand, within Dsui_0970 at 996.299 kb on - strand, within Dsui_0970 at 996.307 kb on - strand, within Dsui_0970 at 996.312 kb on - strand, within Dsui_0970 at 996.321 kb on + strand, within Dsui_0970 at 996.422 kb on + strand, within Dsui_0970 at 996.576 kb on + strand, within Dsui_0970 at 996.595 kb on - strand, within Dsui_0970 at 996.727 kb on + strand at 997.319 kb on + strand, within Dsui_0971 at 997.319 kb on + strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.327 kb on - strand, within Dsui_0971 at 997.332 kb on - strand, within Dsui_0971 at 997.344 kb on - strand, within Dsui_0971 at 997.418 kb on + strand, within Dsui_0971 at 997.452 kb on - strand, within Dsui_0971 at 997.509 kb on - strand, within Dsui_0971 at 997.570 kb on - strand, within Dsui_0971 at 997.630 kb on + strand, within Dsui_0971 at 997.643 kb on - strand, within Dsui_0971 at 997.660 kb on - strand, within Dsui_0971
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 994,575 + Dsui_0969 0.34 -1.4 994,617 + Dsui_0969 0.38 -1.4 994,674 - Dsui_0969 0.43 -2.6 994,723 + Dsui_0969 0.47 -2.2 994,731 - Dsui_0969 0.48 -1.0 994,793 + Dsui_0969 0.53 -1.0 994,831 + Dsui_0969 0.56 -0.4 994,839 - Dsui_0969 0.57 -1.7 994,875 - Dsui_0969 0.60 -0.4 994,979 + Dsui_0969 0.69 +0.6 994,999 - Dsui_0969 0.71 -2.0 995,144 + Dsui_0969 0.83 -0.4 995,152 - +0.6 995,245 + +0.6 995,263 - -0.4 995,299 - +0.6 995,475 + +0.3 995,613 + Dsui_0970 0.11 -0.3 995,645 + Dsui_0970 0.13 +1.6 995,689 + Dsui_0970 0.16 +0.1 996,113 + Dsui_0970 0.49 -0.4 996,135 + Dsui_0970 0.51 +0.6 996,144 - Dsui_0970 0.52 +0.6 996,230 - +0.6 996,247 - Dsui_0970 0.60 -1.4 996,299 - Dsui_0970 0.64 -1.0 996,307 - Dsui_0970 0.64 +0.6 996,312 - Dsui_0970 0.65 -0.4 996,321 + Dsui_0970 0.65 -1.0 996,422 + Dsui_0970 0.73 -0.9 996,576 + Dsui_0970 0.85 -1.3 996,595 - Dsui_0970 0.87 -0.4 996,727 + -3.3 997,319 + Dsui_0971 0.26 +0.6 997,319 + Dsui_0971 0.26 +2.2 997,327 - Dsui_0971 0.27 +1.0 997,327 - Dsui_0971 0.27 -0.6 997,327 - Dsui_0971 0.27 +0.7 997,327 - Dsui_0971 0.27 +1.0 997,327 - Dsui_0971 0.27 -0.1 997,327 - Dsui_0971 0.27 +0.2 997,327 - Dsui_0971 0.27 +0.4 997,327 - Dsui_0971 0.27 -1.2 997,332 - Dsui_0971 0.27 +0.6 997,344 - Dsui_0971 0.28 -0.9 997,418 + Dsui_0971 0.32 -0.4 997,452 - Dsui_0971 0.33 -0.4 997,509 - Dsui_0971 0.37 -0.3 997,570 - Dsui_0971 0.40 -0.6 997,630 + Dsui_0971 0.43 -0.4 997,643 - Dsui_0971 0.44 -0.8 997,660 - Dsui_0971 0.45 -0.0
Or see this region's nucleotide sequence