Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0894 and Dsui_0895 are separated by 83 nucleotides Dsui_0895 and Dsui_0896 are separated by 18 nucleotides
Dsui_0894: Dsui_0894 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 908,275 to 910,899
_0894
Dsui_0895: Dsui_0895 - nitrogen regulatory protein PII, at 910,983 to 911,321
_0895
Dsui_0896: Dsui_0896 - heavy metal efflux pump, cobalt-zinc-cadmium, at 911,340 to 914,450
_0896
Position (kb)
910
911
912 Strain fitness (log2 ratio)
-2
-1
0
1 at 910.037 kb on + strand at 910.046 kb on - strand, within Dsui_0894 at 910.053 kb on + strand, within Dsui_0894 at 910.129 kb on + strand at 910.171 kb on + strand, within Dsui_0894 at 910.179 kb on - strand, within Dsui_0894 at 910.184 kb on + strand, within Dsui_0894 at 910.235 kb on - strand at 910.287 kb on + strand, within Dsui_0894 at 910.287 kb on + strand, within Dsui_0894 at 910.357 kb on + strand, within Dsui_0894 at 910.402 kb on + strand, within Dsui_0894 at 910.460 kb on + strand, within Dsui_0894 at 910.512 kb on + strand, within Dsui_0894 at 910.592 kb on - strand, within Dsui_0894 at 910.631 kb on + strand, within Dsui_0894 at 910.631 kb on + strand, within Dsui_0894 at 910.641 kb on + strand at 910.658 kb on - strand at 910.667 kb on + strand at 910.727 kb on - strand at 910.916 kb on - strand at 911.155 kb on - strand, within Dsui_0895 at 911.155 kb on - strand, within Dsui_0895 at 911.155 kb on - strand, within Dsui_0895 at 911.182 kb on - strand, within Dsui_0895 at 911.274 kb on - strand, within Dsui_0895 at 911.278 kb on - strand, within Dsui_0895 at 911.331 kb on + strand at 911.331 kb on + strand at 911.373 kb on + strand at 911.380 kb on - strand at 911.398 kb on - strand at 911.405 kb on + strand at 911.405 kb on - strand at 911.410 kb on - strand at 911.413 kb on - strand at 911.420 kb on - strand at 911.551 kb on - strand at 911.628 kb on - strand at 911.638 kb on - strand at 911.735 kb on + strand, within Dsui_0896 at 911.786 kb on + strand at 911.794 kb on - strand at 911.824 kb on + strand, within Dsui_0896 at 911.873 kb on + strand, within Dsui_0896 at 911.948 kb on + strand at 911.951 kb on - strand, within Dsui_0896 at 912.029 kb on + strand, within Dsui_0896 at 912.070 kb on - strand, within Dsui_0896 at 912.089 kb on - strand, within Dsui_0896 at 912.199 kb on + strand, within Dsui_0896 at 912.238 kb on + strand, within Dsui_0896
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 910,037 + +0.5 910,046 - Dsui_0894 0.67 +0.5 910,053 + Dsui_0894 0.68 +0.5 910,129 + +0.5 910,171 + Dsui_0894 0.72 -1.5 910,179 - Dsui_0894 0.73 -1.8 910,184 + Dsui_0894 0.73 -1.5 910,235 - +0.5 910,287 + Dsui_0894 0.77 -0.8 910,287 + Dsui_0894 0.77 +0.5 910,357 + Dsui_0894 0.79 -1.1 910,402 + Dsui_0894 0.81 +0.5 910,460 + Dsui_0894 0.83 -0.5 910,512 + Dsui_0894 0.85 +0.5 910,592 - Dsui_0894 0.88 -0.5 910,631 + Dsui_0894 0.90 +0.5 910,631 + Dsui_0894 0.90 -0.5 910,641 + -1.5 910,658 - +0.5 910,667 + +0.5 910,727 - +0.5 910,916 - +0.4 911,155 - Dsui_0895 0.51 -0.1 911,155 - Dsui_0895 0.51 +0.3 911,155 - Dsui_0895 0.51 +0.1 911,182 - Dsui_0895 0.59 -0.6 911,274 - Dsui_0895 0.86 -0.5 911,278 - Dsui_0895 0.87 +0.6 911,331 + +0.5 911,331 + -2.5 911,373 + -0.5 911,380 - +0.2 911,398 - -0.1 911,405 + -1.8 911,405 - -0.1 911,410 - +0.2 911,413 - -1.4 911,420 - +0.2 911,551 - +0.5 911,628 - -1.1 911,638 - -0.5 911,735 + Dsui_0896 0.13 +0.5 911,786 + -0.5 911,794 - -0.5 911,824 + Dsui_0896 0.16 -0.5 911,873 + Dsui_0896 0.17 -0.1 911,948 + +0.5 911,951 - Dsui_0896 0.20 -1.1 912,029 + Dsui_0896 0.22 +0.5 912,070 - Dsui_0896 0.23 -1.5 912,089 - Dsui_0896 0.24 -0.5 912,199 + Dsui_0896 0.28 -1.5 912,238 + Dsui_0896 0.29 +0.5
Or see this region's nucleotide sequence