Experiment: ALP with Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0844 and Dsui_0845 are separated by 123 nucleotides Dsui_0845 and Dsui_0846 are separated by 273 nucleotides
Dsui_0844: Dsui_0844 - ABC-type branched-chain amino acid transport system, periplasmic component, at 860,019 to 861,173
_0844
Dsui_0845: Dsui_0845 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 861,297 to 862,994
_0845
Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142
_0846
Position (kb)
861
862
863 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 860.317 kb on - strand, within Dsui_0844 at 860.399 kb on - strand, within Dsui_0844 at 860.467 kb on + strand, within Dsui_0844 at 860.475 kb on - strand, within Dsui_0844 at 860.567 kb on - strand, within Dsui_0844 at 860.653 kb on + strand, within Dsui_0844 at 860.709 kb on + strand, within Dsui_0844 at 860.768 kb on + strand, within Dsui_0844 at 860.956 kb on - strand, within Dsui_0844 at 860.961 kb on - strand, within Dsui_0844 at 861.001 kb on - strand, within Dsui_0844 at 861.010 kb on + strand, within Dsui_0844 at 861.010 kb on + strand, within Dsui_0844 at 861.018 kb on - strand, within Dsui_0844 at 861.031 kb on - strand, within Dsui_0844 at 861.116 kb on - strand at 861.116 kb on - strand at 861.223 kb on + strand at 861.228 kb on + strand at 861.231 kb on - strand at 861.253 kb on - strand at 861.278 kb on - strand at 861.278 kb on - strand at 861.307 kb on + strand at 861.307 kb on + strand at 861.385 kb on - strand at 861.409 kb on - strand at 861.419 kb on - strand at 861.453 kb on - strand at 861.469 kb on - strand at 861.475 kb on - strand, within Dsui_0845 at 861.531 kb on + strand, within Dsui_0845 at 861.536 kb on + strand, within Dsui_0845 at 861.602 kb on + strand, within Dsui_0845 at 861.610 kb on - strand, within Dsui_0845 at 861.610 kb on - strand, within Dsui_0845 at 861.613 kb on + strand, within Dsui_0845 at 861.615 kb on + strand, within Dsui_0845 at 861.631 kb on - strand, within Dsui_0845 at 861.664 kb on + strand, within Dsui_0845 at 861.664 kb on + strand, within Dsui_0845 at 861.664 kb on + strand, within Dsui_0845 at 861.672 kb on - strand, within Dsui_0845 at 861.683 kb on - strand, within Dsui_0845 at 861.770 kb on - strand, within Dsui_0845 at 861.773 kb on + strand, within Dsui_0845 at 861.787 kb on - strand, within Dsui_0845 at 861.787 kb on - strand, within Dsui_0845 at 861.787 kb on - strand, within Dsui_0845 at 861.814 kb on + strand, within Dsui_0845 at 861.822 kb on - strand, within Dsui_0845 at 861.830 kb on + strand, within Dsui_0845 at 861.848 kb on - strand, within Dsui_0845 at 861.894 kb on - strand, within Dsui_0845 at 861.905 kb on - strand, within Dsui_0845 at 861.905 kb on - strand, within Dsui_0845 at 861.935 kb on - strand, within Dsui_0845 at 861.968 kb on + strand, within Dsui_0845 at 862.016 kb on - strand, within Dsui_0845 at 862.026 kb on - strand, within Dsui_0845 at 862.065 kb on - strand, within Dsui_0845 at 862.080 kb on - strand, within Dsui_0845 at 862.114 kb on - strand, within Dsui_0845 at 862.135 kb on - strand, within Dsui_0845 at 862.248 kb on + strand, within Dsui_0845 at 862.283 kb on - strand, within Dsui_0845 at 862.296 kb on - strand, within Dsui_0845 at 862.306 kb on + strand, within Dsui_0845 at 862.315 kb on + strand, within Dsui_0845 at 862.370 kb on - strand, within Dsui_0845 at 862.384 kb on - strand, within Dsui_0845 at 862.426 kb on + strand, within Dsui_0845 at 862.441 kb on + strand, within Dsui_0845 at 862.467 kb on + strand, within Dsui_0845 at 862.467 kb on + strand, within Dsui_0845 at 862.469 kb on + strand at 862.539 kb on + strand, within Dsui_0845 at 862.589 kb on - strand, within Dsui_0845 at 862.592 kb on + strand, within Dsui_0845 at 862.623 kb on - strand, within Dsui_0845 at 862.645 kb on - strand, within Dsui_0845 at 862.688 kb on + strand, within Dsui_0845 at 862.698 kb on - strand, within Dsui_0845 at 862.698 kb on - strand, within Dsui_0845 at 862.700 kb on + strand, within Dsui_0845 at 862.743 kb on - strand, within Dsui_0845 at 862.743 kb on - strand, within Dsui_0845 at 862.795 kb on - strand, within Dsui_0845 at 862.928 kb on + strand at 862.929 kb on - strand at 862.938 kb on - strand at 862.942 kb on + strand at 863.041 kb on - strand at 863.068 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.214 kb on - strand at 863.779 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.002 mg/ml remove 860,317 - Dsui_0844 0.26 +0.1 860,399 - Dsui_0844 0.33 -0.1 860,467 + Dsui_0844 0.39 +0.2 860,475 - Dsui_0844 0.39 +0.1 860,567 - Dsui_0844 0.47 +0.1 860,653 + Dsui_0844 0.55 +0.5 860,709 + Dsui_0844 0.60 -0.5 860,768 + Dsui_0844 0.65 +0.5 860,956 - Dsui_0844 0.81 +0.0 860,961 - Dsui_0844 0.82 -0.0 861,001 - Dsui_0844 0.85 +0.0 861,010 + Dsui_0844 0.86 -1.5 861,010 + Dsui_0844 0.86 +0.5 861,018 - Dsui_0844 0.86 -0.3 861,031 - Dsui_0844 0.88 -0.9 861,116 - -0.4 861,116 - -0.1 861,223 + +0.5 861,228 + +0.5 861,231 - -0.5 861,253 - -0.8 861,278 - -1.1 861,278 - +0.5 861,307 + +0.5 861,307 + +0.5 861,385 - +0.5 861,409 - -0.5 861,419 - -0.5 861,453 - +1.1 861,469 - +0.5 861,475 - Dsui_0845 0.10 -1.1 861,531 + Dsui_0845 0.14 +0.5 861,536 + Dsui_0845 0.14 +0.5 861,602 + Dsui_0845 0.18 +0.5 861,610 - Dsui_0845 0.18 -0.3 861,610 - Dsui_0845 0.18 -3.4 861,613 + Dsui_0845 0.19 +0.5 861,615 + Dsui_0845 0.19 -1.1 861,631 - Dsui_0845 0.20 -0.2 861,664 + Dsui_0845 0.22 -0.5 861,664 + Dsui_0845 0.22 -1.1 861,664 + Dsui_0845 0.22 +0.5 861,672 - Dsui_0845 0.22 -1.3 861,683 - Dsui_0845 0.23 -0.8 861,770 - Dsui_0845 0.28 -0.7 861,773 + Dsui_0845 0.28 +0.5 861,787 - Dsui_0845 0.29 -0.5 861,787 - Dsui_0845 0.29 -0.7 861,787 - Dsui_0845 0.29 -1.1 861,814 + Dsui_0845 0.30 -0.5 861,822 - Dsui_0845 0.31 -0.1 861,830 + Dsui_0845 0.31 +0.5 861,848 - Dsui_0845 0.32 -2.3 861,894 - Dsui_0845 0.35 -1.3 861,905 - Dsui_0845 0.36 -1.5 861,905 - Dsui_0845 0.36 -1.1 861,935 - Dsui_0845 0.38 -0.9 861,968 + Dsui_0845 0.40 +0.5 862,016 - Dsui_0845 0.42 -0.8 862,026 - Dsui_0845 0.43 +0.5 862,065 - Dsui_0845 0.45 -0.2 862,080 - Dsui_0845 0.46 +2.1 862,114 - Dsui_0845 0.48 -0.4 862,135 - Dsui_0845 0.49 -1.1 862,248 + Dsui_0845 0.56 -1.1 862,283 - Dsui_0845 0.58 -0.1 862,296 - Dsui_0845 0.59 -0.1 862,306 + Dsui_0845 0.59 -2.1 862,315 + Dsui_0845 0.60 -0.5 862,370 - Dsui_0845 0.63 +1.5 862,384 - Dsui_0845 0.64 +1.5 862,426 + Dsui_0845 0.66 -2.5 862,441 + Dsui_0845 0.67 -1.1 862,467 + Dsui_0845 0.69 -1.1 862,467 + Dsui_0845 0.69 -0.5 862,469 + +0.5 862,539 + Dsui_0845 0.73 -2.3 862,589 - Dsui_0845 0.76 -0.5 862,592 + Dsui_0845 0.76 +0.5 862,623 - Dsui_0845 0.78 -1.7 862,645 - Dsui_0845 0.79 +0.5 862,688 + Dsui_0845 0.82 -0.5 862,698 - Dsui_0845 0.83 -0.2 862,698 - Dsui_0845 0.83 -1.3 862,700 + Dsui_0845 0.83 +0.5 862,743 - Dsui_0845 0.85 -0.2 862,743 - Dsui_0845 0.85 +0.3 862,795 - Dsui_0845 0.88 -2.1 862,928 + -1.1 862,929 - +0.5 862,938 - -1.3 862,942 + +0.5 863,041 - +0.5 863,068 + -0.5 863,206 + +0.0 863,206 + +0.0 863,206 + -0.4 863,206 + -0.0 863,206 + -0.1 863,214 - -0.5 863,779 - +0.5
Or see this region's nucleotide sequence